RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA662254" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA662254 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7006855 7006855 PRJNA662254_P_NODE_22186_length_349_cov_1.394928_g21535_i0 PRJNA662254 22186 349 1.394928 4.86829872 Anneissia japonica 1529436 Echinodermata other_Eukaryota 181 2.7e-53   NR XP_033102093.1 1529436 g21535 i0 66.4 11.5873925501433 113 38 97.1 0 1 339 162 274 XP_033102093.1 glutamine synthetase-like [Anneissia japonica] diamond 4044 181 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
17206467 17206467 PRJNA662254_P_NODE_8274_length_585_cov_2.750000_g7644_i0 PRJNA662254 8274 585 2.75 16.0875 Metazoa 33208 Echinodermata other_Eukaryota 266 4.839999999999999e-87   NR XP_030830317.1 7668 g7644 i0 66.3 29.5025641025641 193 64 98.5 1 576 1 44 236 XP_030830317.1 60S ribosomal protein L7 [Strongylocentrotus purpuratus] diamond 17259 266 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
19755201 19755201 PRJNA662254_P_NODE_27556_length_315_cov_2.805785_g26905_i0 PRJNA662254 27556 315 2.805785 8.83822275 Metazoa 33208 Echinodermata other_Eukaryota 156 3.23e-44   NR XP_071502009.1 105358 g26905 i0 77.6 15.0666666666667 98 22 93.3 0 295 2 27 124 XP_071502009.1 malate dehydrogenase, mitochondrial-like [Diadema antillarum] diamond 4746 156 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
26713515 26713515 PRJNA662254_P_NODE_59021_length_244_cov_0.900585_g58370_i0 PRJNA662254 59021 244 0.900585 2.1974274 Metazoa 33208 Echinodermata other_Eukaryota 105 2.8099999999999998e-24   NR XP_041474573.1 7654 g58370 i0 60.5 22.6844262295082 76 30 93.4 0 228 1 5 80 XP_041474573.1 epsin-2-like [Lytechinus variegatus] diamond 5535 105 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
27977926 27977926 PRJNA662254_P_NODE_15525_length_416_cov_2.813411_g14874_i0 PRJNA662254 15525 416 2.813411 11.70378976 Opisthokonta 33154 Echinodermata other_Eukaryota 127 7.959999999999998e-35   NR KAJ8030924.1 206669 g14874 i0 51.2 1.83173076923077 127 61 91.6 1 21 401 1 126 KAJ8030924.1 Profilin-1A [Holothuria leucospilota] diamond 762 128 0.9921875 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30081218 30081218 PRJNA662254_P_NODE_28552_length_310_cov_1.582278_g27901_i0 PRJNA662254 28552 310 1.582278 4.9050618 Acanthaster planci 133434 Echinodermata other_Eukaryota 43.5 0.0468   NR XP_022111824.1 133434 g27901 i0 69 0.280645161290323 29 9 28.1 0 90 4 4215 4243 XP_022111824.1 prolow-density lipoprotein receptor-related protein 1-like [Acanthaster planci] diamond 87 43.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
31041785 31041785 PRJNA662254_P_NODE_44915_length_251_cov_0.865169_g44264_i0 PRJNA662254 44915 251 0.865169 2.17157419 Metazoa 33208 Echinodermata other_Eukaryota 67 1.15e-10   NR KAJ8029725.1 206669 g44264 i0 56.1 2.67729083665339 57 23 65.7 1 248 84 418 474 KAJ8029725.1 hypothetical protein HOLleu_29190 [Holothuria leucospilota] diamond 672 67.4 0.99406528189911 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
31661532 31661532 PRJNA662254_P_NODE_63457_length_242_cov_0.911243_g62806_i0 PRJNA662254 63457 242 0.911243 2.20520806 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 73.9 3.7e-13   NR KAJ8025031.1 206669 g62806 i0 63.2 1.97107438016529 57 16 69.4 2 59 226 124 176 KAJ8025031.1 Polypeptide N-acetylgalactosaminyltransferase 1 [Holothuria leucospilota] diamond 477 73.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32136324 32136324 PRJNA662254_P_NODE_5398_length_748_cov_2.122963_g4811_i0 PRJNA662254 5398 748 2.122963 15.87976324 Asterias rubens 7604 Echinodermata other_Eukaryota 157 2.6899999999999998e-43   NR XP_033634008.1 7604 g4811 i0 54.5 4.64839572192513 167 74 67 1 1 501 66 230 XP_033634008.1 40S ribosomal protein S6-like [Asterias rubens] diamond 3477 157 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;