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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA661142" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 26 ✖

bioproject 1

  • PRJNA661142 · 26 ✖

analysis 1

  • diamond · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1904224 1904224 PRJNA661142_P_NODE_11342_length_167_cov_0.864407_g11277_i0 PRJNA661142 11342 167 0.864407 1.44355969 Methanoregula sp. 2052170 Archaea Archaea 100 4.37e-23   NR HJX56246.1 2052170 g11277 i0 85.5 1.97604790419162 55 8 98.8 0 166 2 69 123 HJX56246.1 methionine--tRNA ligase [Methanoregula sp.] diamond 330 100 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
14657061 14657061 PRJNA661142_P_NODE_11692_length_166_cov_0.871795_g11627_i0 PRJNA661142 11692 166 0.871795 1.4471797 Thermoplasmata archaeon 1906666 Archaea Archaea 112 2.4199999999999998e-27   NR MEM4728365.1 1906666 g11627 i0 87.3 1.98795180722892 55 7 99.4 0 165 1 215 269 MEM4728365.1 cysteine--tRNA ligase [Thermoplasmata archaeon] diamond 330 112 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
26764883 26764883 PRJNA661142_P_NODE_12741_length_161_cov_0.910714_g12676_i0 PRJNA661142 12741 161 0.910714 1.46624954 Methanoregula sp. 2052170 Archaea Archaea 84.7 5.03e-19   NR HSQ92742.1 2052170 g12676 i0 77.4 0.987577639751553 53 12 98.8 0 2 160 40 92 HSQ92742.1 phosphate-starvation-inducible PsiE family protein [Methanoregula sp.] diamond 159 84.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
26986359 26986359 PRJNA661142_P_NODE_11882_length_165_cov_0.879310_g11817_i0 PRJNA661142 11882 165 0.87931 1.4508615 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 60.1 9.7e-9   NR MBI5158644.1 2250274 g11817 i0 49.1 0.963636363636364 53 25 94.5 2 160 5 1004 1055 MBI5158644.1 thrombospondin type 3 repeat-containing protein [Candidatus Micrarchaeota archaeon] diamond 159 60.1 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
26998520 26998520 PRJNA661142_P_NODE_12782_length_161_cov_0.910714_g12717_i0 PRJNA661142 12782 161 0.910714 1.46624954 Methanothrix 2222 Archaea Archaea 99 9.18e-23   NR WP_287489790.1 2222 g12717 i0 90.6 3.95031055900621 53 5 98.8 0 160 2 131 183 WP_287489790.1 MULTISPECIES: proteasome-activating nucleotidase [Methanothrix] diamond 636 100 0.99 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix  
27018098 27018098 PRJNA661142_P_NODE_11902_length_165_cov_0.879310_g11837_i0 PRJNA661142 11902 165 0.87931 1.4508615 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 94.4 1.05e-21   NR HEX9862958.1 3045160 g11837 i0 90.7 0.981818181818182 54 5 98.2 0 163 2 112 165 HEX9862958.1 A24 family peptidase C-terminal domain-containing protein [Candidatus Bathyarchaeia archaeon] diamond 162 94.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
27144176 27144176 PRJNA661142_P_NODE_11402_length_167_cov_0.864407_g11337_i0 PRJNA661142 11402 167 0.864407 1.44355969 Thermoplasmata archaeon 1906666 Archaea Archaea 90.9 1.56e-20   NR HEV8594469.1 1906666 g11337 i0 79.6 0.970059880239521 54 11 97 0 166 5 27 80 HEV8594469.1 class I SAM-dependent methyltransferase [Thermoplasmata archaeon] diamond 162 90.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27555138 27555138 PRJNA661142_P_NODE_11884_length_165_cov_0.879310_g11819_i0 PRJNA661142 11884 165 0.87931 1.4508615 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 47.4 2.71e-4   NR MCW4025311.1 2026714 g11819 i0 77.8 0.490909090909091 27 6 49.1 0 80 160 1 27 MCW4025311.1 indole-3-glycerol-phosphate synthase [Candidatus Bathyarchaeota archaeon] diamond 81 47.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29134248 29134248 PRJNA661142_P_NODE_12289_length_163_cov_0.894737_g12224_i0 PRJNA661142 12289 163 0.894737 1.45842131 Thermoplasmata archaeon 1906666 Archaea Archaea 77.4 7.61e-15   NR RLF33979.1 1906666 g12224 i0 68.5 0.993865030674847 54 17 99.4 0 162 1 402 455 RLF33979.1 MAG: hypothetical protein DRN08_05045, partial [Thermoplasmata archaeon] diamond 162 77.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29449540 29449540 PRJNA661142_P_NODE_810_length_774_cov_90.179310_g759_i0 PRJNA661142 810 774 90.17931 697.9878594 Promethearchaeia archaeon 3067280 Archaea Archaea 49.3 0.0119   NR MFO7795213.1 3067280 g759 i0 71.9 0.124031007751938 32 9 12.4 0 474 569 373 404 MFO7795213.1 reverse transcriptase family protein [Promethearchaeia archaeon] diamond 96 49.3 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
29607253 29607253 PRJNA661142_P_NODE_11570_length_166_cov_0.871795_g11505_i0 PRJNA661142 11570 166 0.871795 1.4471797 archaeon 1906665 Archaea Archaea 66.2 8.25e-12   NR MBT4376130.1 1906665 g11505 i0 58.5 0.957831325301205 53 22 95.8 0 5 163 46 98 MBT4376130.1 HD domain-containing protein [archaeon] diamond 159 66.2 1 Archaea               archaeon
30112900 30112900 PRJNA661142_P_NODE_12572_length_162_cov_0.902655_g12507_i0 PRJNA661142 12572 162 0.902655 1.4623011 Candidatus Bathyarchaeota archaeon A05DMB-2 2709783 Archaea Archaea 102 4.43e-25   NR MBT0160244.1 2709783 g12507 i0 98.1 0.981481481481482 53 1 98.1 0 161 3 14 66 MBT0160244.1 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase [Candidatus Bathyarchaeota archaeon A05DMB-2] diamond 159 102 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon A05DMB-2
30207485 30207485 PRJNA661142_P_NODE_11832_length_165_cov_0.879310_g11767_i0 PRJNA661142 11832 165 0.87931 1.4508615 Methanotrichaceae archaeon 2595067 Archaea Archaea 63.2 7.86e-10   NR MCJ7445432.1 2595067 g11767 i0 93.5 0.563636363636364 31 2 56.4 0 163 71 439 469 MCJ7445432.1 NAD(P)H-hydrate dehydratase [Methanotrichaceae archaeon] diamond 93 63.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
30397856 30397856 PRJNA661142_P_NODE_11673_length_166_cov_0.871795_g11608_i0 PRJNA661142 11673 166 0.871795 1.4471797 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 105 1.5e-27   NR MCJ7631787.1 2026714 g11608 i0 83.6 0.993975903614458 55 9 99.4 0 165 1 79 133 MCJ7631787.1 YkgJ family cysteine cluster protein [Candidatus Bathyarchaeota archaeon] diamond 165 105 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30460976 30460976 PRJNA661142_P_NODE_11993_length_164_cov_0.886957_g11928_i0 PRJNA661142 11993 164 0.886957 1.45460948 Thermoplasmata archaeon 1906666 Archaea Archaea 55.5 4.16e-7   NR UCC92922.1 1906666 g11928 i0 49 0.896341463414634 49 25 89.6 0 17 163 1830 1878 UCC92922.1 MAG: PKD domain-containing protein [Thermoplasmata archaeon] diamond 147 55.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30744920 30744920 PRJNA661142_P_NODE_11354_length_167_cov_0.864407_g11289_i0 PRJNA661142 11354 167 0.864407 1.44355969 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 97.1 3.3400000000000003e-22   NR MBM5805436.1 2250257 g11289 i0 92.5 0.952095808383233 53 4 95.2 0 9 167 78 130 MBM5805436.1 fructose 1,6-bisphosphatase [Candidatus Methanomethylicota archaeon] diamond 159 97.1 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon
30808107 30808107 PRJNA661142_P_NODE_12434_length_162_cov_0.902655_g12369_i0 PRJNA661142 12434 162 0.902655 1.4623011 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 93.2 2.05e-20   NR MBM3292158.1 2026714 g12369 i0 81.1 0.981481481481482 53 10 98.1 0 160 2 443 495 MBM3292158.1 4Fe-4S dicluster domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 159 93.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31092455 31092455 PRJNA661142_P_NODE_12515_length_162_cov_0.902655_g12450_i0 PRJNA661142 12515 162 0.902655 1.4623011 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 88.6 8.23e-19   NR MCL5730318.1 2026773 g12450 i0 86.8 0.981481481481482 53 7 98.1 0 160 2 396 448 MCL5730318.1 L-lactate permease [Candidatus Pacearchaeota archaeon] diamond 159 88.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
31313713 31313713 PRJNA661142_P_NODE_12095_length_164_cov_0.886957_g12030_i0 PRJNA661142 12095 164 0.886957 1.45460948 Nitrosotalea sp. 2833567 Archaea Archaea 107 1.51e-28   NR HXU95452.1 2833567 g12030 i0 92.6 0.98780487804878 54 4 98.8 0 2 163 22 75 HXU95452.1 DedA family protein [Nitrosotalea sp.] diamond 162 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea sp.
31547536 31547536 PRJNA661142_P_NODE_11576_length_166_cov_0.871795_g11511_i0 PRJNA661142 11576 166 0.871795 1.4471797 Archaea 2157 Archaea Archaea 79 8.97e-18   NR KON29633.1 1685124 g11511 i0 65.4 7.30120481927711 52 18 94 0 3 158 13 64 KON29633.1 MAG: hypothetical protein AC477_05675 [miscellaneous Crenarchaeota group-1 archaeon SG8-32-1] diamond 1212 79.7 0.991217063989962 Archaea MCG-1 Thermoproteati Candidatus Bathyarchaeota         miscellaneous Crenarchaeota group-1 archaeon SG8-32-1
31598587 31598587 PRJNA661142_P_NODE_11696_length_166_cov_0.871795_g11631_i0 PRJNA661142 11696 166 0.871795 1.4471797 Methanoregulaceae archaeon 2485498 Archaea Archaea 108 3.56e-28   NR MDD1711460.1 2485498 g11631 i0 90.9 1.98795180722892 55 5 99.4 0 166 2 20 74 MDD1711460.1 DUF2764 domain-containing protein [Methanoregulaceae archaeon] diamond 330 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31946165 31946165 PRJNA661142_P_NODE_11937_length_165_cov_0.879310_g11872_i0 PRJNA661142 11937 165 0.87931 1.4508615 Methanoregula sp. 2052170 Archaea Archaea 81.6 2.42e-16   NR MFA5347642.1 2052170 g11872 i0 70.4 0.981818181818182 54 16 98.2 0 163 2 317 370 MFA5347642.1 aldehyde dehydrogenase family protein [Methanoregula sp.] diamond 162 81.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
32009675 32009675 PRJNA661142_P_NODE_12218_length_163_cov_0.894737_g12153_i0 PRJNA661142 12218 163 0.894737 1.45842131 Methanobacteriota archaeon 2026739 Archaea Archaea 62.4 1.48e-9   NR MFH1835520.1 2026739 g12153 i0 59.3 0.993865030674847 54 22 99.4 0 163 2 516 569 MFH1835520.1 hypothetical protein [Methanobacteriota archaeon] diamond 162 62.4 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32199561 32199561 PRJNA661142_P_NODE_12418_length_162_cov_0.902655_g12353_i0 PRJNA661142 12418 162 0.902655 1.4623011 Methanotrichaceae archaeon 2595067 Archaea Archaea 78.2 5.25e-17   NR MDM7912324.1 2595067 g12353 i0 82 2.83333333333333 50 9 92.6 0 11 160 2 51 MDM7912324.1 TMEM165/GDT1 family protein [Methanotrichaceae archaeon] diamond 459 78.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
32579302 32579302 PRJNA661142_P_NODE_12239_length_163_cov_0.894737_g12174_i0 PRJNA661142 12239 163 0.894737 1.45842131 Methanotrichaceae archaeon 2595067 Archaea Archaea 83.6 1.72e-17   NR HSD57461.1 2595067 g12174 i0 70.4 0.993865030674847 54 16 99.4 0 1 162 116 169 HSD57461.1 calcium/sodium antiporter [Methanotrichaceae archaeon] diamond 162 83.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae   Methanotrichaceae archaeon
32831047 32831047 PRJNA661142_P_NODE_12040_length_164_cov_0.886957_g11975_i0 PRJNA661142 12040 164 0.886957 1.45460948 Thermoplasmatales archaeon 2268204 Archaea Archaea 112 4.3e-28   NR MBP1662522.1 2268204 g11975 i0 98.1 0.969512195121951 53 1 97 0 4 162 141 193 MBP1662522.1 glycosyltransferase [Thermoplasmatales archaeon] diamond 159 112 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;