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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA661142" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA661142 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27049906 27049906 PRJNA661142_P_NODE_11922_length_165_cov_0.879310_g11857_i0 PRJNA661142 11922 165 0.87931 1.4508615 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 82.8 9.66e-17   NR MBM4288065.1 2026735 g11857 i0 83 0.963636363636364 53 9 96.4 0 3 161 114 166 MBM4288065.1 PAS domain S-box protein [Deltaproteobacteria bacterium] diamond 159 82.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27176011 27176011 PRJNA661142_P_NODE_11442_length_167_cov_0.864407_g11377_i0 PRJNA661142 11442 167 0.864407 1.44355969 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 55.8 1.72e-7   NR NTV32037.1 2026735 g11377 i0 84.4 0.574850299401198 32 5 57.5 0 71 166 1 32 NTV32037.1 DUF3786 domain-containing protein [Deltaproteobacteria bacterium] diamond 96 55.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27207608 27207608 PRJNA661142_P_NODE_12702_length_161_cov_0.910714_g12637_i0 PRJNA661142 12702 161 0.910714 1.46624954 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 59.3 1.72e-8   NR MBW2182437.1 2026735 g12637 i0 52.8 1.97515527950311 53 25 98.8 0 2 160 413 465 MBW2182437.1 M48 family metalloprotease [Deltaproteobacteria bacterium] diamond 318 59.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27650182 27650182 PRJNA661142_P_NODE_11464_length_167_cov_0.864407_g11399_i0 PRJNA661142 11464 167 0.864407 1.44355969 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 61.6 1.83e-10   NR MBM4305146.1 2026735 g11399 i0 49.1 1.97604790419162 55 28 98.8 0 1 165 19 73 MBM4305146.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 330 61.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27839323 27839323 PRJNA661142_P_NODE_12144_length_164_cov_0.886957_g12079_i0 PRJNA661142 12144 164 0.886957 1.45460948 Haliangiales bacterium 3069304 Bacteria Bacteria 59.3 1.81e-8   NR HKA89931.1 3069304 g12079 i0 56.6 0.969512195121951 53 23 97 0 2 160 1393 1445 HKA89931.1 tetratricopeptide repeat protein [Haliangiales bacterium] diamond 159 59.3 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales     Haliangiales bacterium
27902461 27902461 PRJNA661142_P_NODE_2565_length_492_cov_68.115124_g2502_i0 PRJNA661142 2565 492 68.115124 335.12641008 Polyangiaceae bacterium 2268199 Bacteria Bacteria 137 1.2599999999999999e-34   NR MDF3066060.1 2268199 g2502 i0 49.7 0.981707317073171 161 66 98.2 5 490 8 301 446 MDF3066060.1 hypothetical protein [Polyangiaceae bacterium] diamond 483 137 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28944883 28944883 PRJNA661142_P_NODE_12728_length_161_cov_0.910714_g12663_i0 PRJNA661142 12728 161 0.910714 1.46624954 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 92.4 1.33e-21   NR MCX5878045.1 2026735 g12663 i0 81.1 0.987577639751553 53 10 98.8 0 161 3 23 75 MCX5878045.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 159 92.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28976276 28976276 PRJNA661142_P_NODE_11668_length_166_cov_0.871795_g11603_i0 PRJNA661142 11668 166 0.871795 1.4471797 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 116 3.4399999999999995e-31   NR NTV33772.1 2026735 g11603 i0 94.5 0.993975903614458 55 3 99.4 0 166 2 65 119 NTV33772.1 HAD hydrolase family protein [Deltaproteobacteria bacterium] diamond 165 116 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29165822 29165822 PRJNA661142_P_NODE_12349_length_163_cov_0.894737_g12284_i0 PRJNA661142 12349 163 0.894737 1.45842131 Kofleriaceae bacterium 2212474 Bacteria Bacteria 62.4 1.41e-9   NR MEO8549637.1 2212474 g12284 i0 57.1 3.0920245398773 56 21 97.5 1 161 3 270 325 MEO8549637.1 hypothetical protein [Kofleriaceae bacterium] diamond 504 62.4 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
29986626 29986626 PRJNA661142_P_NODE_12331_length_163_cov_0.894737_g12266_i0 PRJNA661142 12331 163 0.894737 1.45842131 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 117 1.7599999999999998e-32   NR MBI2183162.1 2026735 g12266 i0 94.4 1.98773006134969 54 3 99.4 0 2 163 12 65 MBI2183162.1 (2Fe-2S) ferredoxin domain-containing protein [Deltaproteobacteria bacterium] diamond 324 117 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29998948 29998948 PRJNA661142_P_NODE_11451_length_167_cov_0.864407_g11386_i0 PRJNA661142 11451 167 0.864407 1.44355969 Pseudomonadati 3379134 Bacteria Bacteria 96.3 3.62e-22   NR MBI5545021.1 2026735 g11386 i0 72.7 6.84431137724551 55 15 98.8 0 166 2 135 189 MBI5545021.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 1143 96.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30207486 30207486 PRJNA661142_P_NODE_12092_length_164_cov_0.886957_g12027_i0 PRJNA661142 12092 164 0.886957 1.45460948 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 52.4 5.03e-6   NR NTV59124.1 2026735 g12027 i0 83.3 1.09756097560976 30 5 54.9 0 1 90 458 487 NTV59124.1 30S ribosomal protein S1 [Deltaproteobacteria bacterium] diamond 180 52.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30492197 30492197 PRJNA661142_P_NODE_11733_length_166_cov_0.871795_g11668_i0 PRJNA661142 11733 166 0.871795 1.4471797 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 56.2 3.33e-8   NR MBP1699999.1 2026735 g11668 i0 51.9 0.975903614457831 54 25 97.6 1 164 3 66 118 MBP1699999.1 AhpC/TSA family [Deltaproteobacteria bacterium] diamond 162 56.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30681486 30681486 PRJNA661142_P_NODE_11933_length_165_cov_0.879310_g11868_i0 PRJNA661142 11933 165 0.87931 1.4508615 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 70.1 3.09e-13   NR HOI07158.1 2026735 g11868 i0 75.5 1.92727272727273 53 13 96.4 0 163 5 10 62 HOI07158.1 VTT domain-containing protein [Deltaproteobacteria bacterium] diamond 318 70.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31135908 31135908 PRJNA661142_P_NODE_11875_length_165_cov_0.879310_g11810_i0 PRJNA661142 11875 165 0.87931 1.4508615 Pseudomonadati 3379134 Bacteria Bacteria 75.9 3.39e-15   NR MBN1615156.1 2026735 g11810 i0 92.3 5.83636363636364 39 3 70.9 0 119 3 33 71 MBN1615156.1 cob(I)yrinic acid a,c-diamide adenosyltransferase [Deltaproteobacteria bacterium] diamond 963 75.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31186944 31186944 PRJNA661142_P_NODE_11615_length_166_cov_0.871795_g11550_i0 PRJNA661142 11615 166 0.871795 1.4471797 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 94 1.4e-21   NR MBW2653316.1 2026735 g11550 i0 90.7 2.92771084337349 54 5 97.6 0 164 3 204 257 MBW2653316.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 486 94 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31281996 31281996 PRJNA661142_P_NODE_11675_length_166_cov_0.871795_g11610_i0 PRJNA661142 11675 166 0.871795 1.4471797 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 111 2.9100000000000003e-27   NR MCX5877851.1 2026735 g11610 i0 96.4 0.993975903614458 55 2 99.4 0 1 165 36 90 MCX5877851.1 AsmA family protein [Deltaproteobacteria bacterium] diamond 165 111 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31535328 31535328 PRJNA661142_P_NODE_12016_length_164_cov_0.886957_g11951_i0 PRJNA661142 12016 164 0.886957 1.45460948 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 116 8.62e-29   NR MBN2576475.1 2026735 g11951 i0 96.3 0.98780487804878 54 2 98.8 0 163 2 172 225 MBN2576475.1 phytoene desaturase [Deltaproteobacteria bacterium] diamond 162 116 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31768687 31768687 PRJNA661142_P_NODE_12697_length_161_cov_0.910714_g12632_i0 PRJNA661142 12697 161 0.910714 1.46624954 Pseudomonadati 3379134 Bacteria Bacteria 80.9 4.4e-16   NR MCX5908289.1 2026735 g12632 i0 77.4 11.8509316770186 53 12 98.8 0 1 159 693 745 MCX5908289.1 response regulator [Deltaproteobacteria bacterium] diamond 1908 80.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31977930 31977930 PRJNA661142_P_NODE_11878_length_165_cov_0.879310_g11813_i0 PRJNA661142 11878 165 0.87931 1.4508615 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 70.5 8.8e-13   NR MBN1381707.1 2026735 g11813 i0 61.8 1 55 21 100 0 1 165 110 164 MBN1381707.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 165 70.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32294780 32294780 PRJNA661142_P_NODE_10079_length_213_cov_0.932927_g10014_i0 PRJNA661142 10079 213 0.932927 1.98713451 Myxococcales bacterium 2026763 Bacteria Bacteria 42.4 0.0338   NR MDB4979583.1 2026763 g10014 i0 43.9 0.929577464788732 66 28 93 3 208 11 3 59 MDB4979583.1 synthase [Myxococcales bacterium] diamond 198 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;