RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA661142" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA661142 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30978422 30978422 PRJNA661142_P_NODE_12634_length_161_cov_0.910714_g12569_i0 PRJNA661142 12634 161 0.910714 1.46624954 Pseudomonadati 3379134 Bacteria Bacteria 108 7.060000000000001e-26   NR OQB39991.1 1852849 g12569 i0 90.6 1.97515527950311 53 5 98.8 0 160 2 484 536 OQB39991.1 MAG: translocation protein TolB [Candidatus Hydrogenedentes bacterium ADurb.Bin179] diamond 318 108 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentes bacterium ADurb.Bin179
31420807 31420807 PRJNA661142_P_NODE_12236_length_163_cov_0.894737_g12171_i0 PRJNA661142 12236 163 0.894737 1.45842131 Bacteria 2 Bacteria Bacteria 92.8 2.92e-20   NR MBI5094079.1 2030809 g12171 i0 77.8 2.92638036809816 54 12 99.4 0 162 1 327 380 MBI5094079.1 VWA domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 477 92.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;