RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA661142" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA661142 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26986359 26986359 PRJNA661142_P_NODE_11882_length_165_cov_0.879310_g11817_i0 PRJNA661142 11882 165 0.87931 1.4508615 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 60.1 9.7e-9   NR MBI5158644.1 2250274 g11817 i0 49.1 0.963636363636364 53 25 94.5 2 160 5 1004 1055 MBI5158644.1 thrombospondin type 3 repeat-containing protein [Candidatus Micrarchaeota archaeon] diamond 159 60.1 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
31092455 31092455 PRJNA661142_P_NODE_12515_length_162_cov_0.902655_g12450_i0 PRJNA661142 12515 162 0.902655 1.4623011 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 88.6 8.23e-19   NR MCL5730318.1 2026773 g12450 i0 86.8 0.981481481481482 53 7 98.1 0 160 2 396 448 MCL5730318.1 L-lactate permease [Candidatus Pacearchaeota archaeon] diamond 159 88.6 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;