RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA658591" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA658591 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27460735 27460735 PRJNA658591_S_NODE_2163_length_288_cov_1.761506_g2100_i0 PRJNA658591 2163 288 1.761506 5.07313728 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.7 0.0463   NR NOX57076.1 2026780 g2100 i0 40 0.46875 45 27 46.9 0 238 104 143 187 NOX57076.1 hypothetical protein [Planctomycetota bacterium] diamond 135 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29291846 29291846 PRJNA658591_S_NODE_8849_length_169_cov_0.866667_g8786_i0 PRJNA658591 8849 169 0.866667 1.46466723 Phycisphaerales bacterium 2052180 Bacteria Bacteria 42.7 0.0141   NR UCG46482.1 2052180 g8786 i0 45.1 0.905325443786982 51 23 90.5 2 157 5 99 144 UCG46482.1 MAG: hypothetical protein JSU94_13365, partial [Phycisphaerales bacterium] diamond 153 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;