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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA658591" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA658591 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1901651 1901651 PRJNA658591_S_NODE_2402_length_275_cov_3.283186_g2339_i0 PRJNA658591 2402 275 3.283186 9.0287615 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 149 2.73e-39   NR KAL4159755.1 164328 g2339 i0 82.4 12.9709090909091 85 15 92.7 0 255 1 1234 1318 KAL4159755.1 hypothetical protein PRNP1_000328 [Phytophthora ramorum] diamond 3567 149 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
3176354 3176354 PRJNA658591_S_NODE_3283_length_243_cov_1.268041_g3220_i0 PRJNA658591 3283 243 1.268041 3.08133963 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 154 2.82e-41   NR XP_024573305.1 4781 g3220 i0 88.8 10.8641975308642 80 9 98.8 0 241 2 554 633 XP_024573305.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3a-like [Plasmopara halstedii] diamond 2640 155 0.993548387096774 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
4453388 4453388 PRJNA658591_S_NODE_284_length_674_cov_9.416000_g232_i0 PRJNA658591 284 674 9.416 63.46384 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 332 6.189999999999999e-110   NR RLN26386.1 325452 g232 i0 72.4 5.6973293768546 214 59 95.3 0 32 673 179 392 RLN26386.1 hypothetical protein BBI17_008018 [Phytophthora kernoviae] diamond 3840 335 0.991044776119403 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora kernoviae
22302773 22302773 PRJNA658591_S_NODE_9678_length_165_cov_0.896552_g9615_i0 PRJNA658591 9678 165 0.896552 1.4793108 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 98.2 3.72e-22   NR OWZ06631.1 4795 g9615 i0 85.2 12.7636363636364 54 8 98.2 0 164 3 439 492 OWZ06631.1 LOW QUALITY PROTEIN: hypothetical protein PHMEG_00021088, partial [Phytophthora megakarya] diamond 2106 99 0.991919191919192 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
22838814 22838814 PRJNA658591_S_NODE_1818_length_309_cov_28.323077_g1755_i0 PRJNA658591 1818 309 28.323077 87.51830793 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 147 1.43e-40   NR OQS04692.1 74557 g1755 i0 83.7 5.9126213592233 86 14 83.5 0 50 307 1 86 OQS04692.1 aspartyl/Asparaginyl beta-hydroxylase [Thraustotheca clavata] diamond 1827 147 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
24113350 24113350 PRJNA658591_S_NODE_2019_length_296_cov_5.417004_g1956_i0 PRJNA658591 2019 296 5.417004 16.03433184 Saprolegnia diclina VS2 112098 SAR_Eukaryotes SAR_Eukaryotes 160 4.4799999999999984e-43   NR XP_008610586.1 1156394 g1956 i0 81.5 9.40540540540541 92 17 93.2 0 282 7 1 92 XP_008610586.1 hypothetical protein SDRG_06578 [Saprolegnia diclina VS20] diamond 2784 160 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
26891754 26891754 PRJNA658591_S_NODE_4721_length_212_cov_1.595092_g4658_i0 PRJNA658591 4721 212 1.595092 3.38159504 Lagenidium giganteum 4803 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0135   NR DAZ92443.1 4803 g4658 i0 40 2.75943396226415 70 36 90.6 2 10 201 671 740 DAZ92443.1 TPA: hypothetical protein N0F65_000227 [Lagenidium giganteum] diamond 585 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
26903892 26903892 PRJNA658591_S_NODE_2561_length_268_cov_2.863014_g2498_i0 PRJNA658591 2561 268 2.863014 7.67287752 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 133 5.9899999999999985e-34   NR RHY66061.1 112090 g2498 i0 70.5 25.6119402985075 88 26 98.5 0 3 266 764 851 RHY66061.1 hypothetical protein DYB34_009266, partial [Aphanomyces astaci] diamond 6864 133 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27018071 27018071 PRJNA658591_S_NODE_4562_length_215_cov_1.367470_g4499_i0 PRJNA658591 4562 215 1.36747 2.9400605 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 52 1.39e-5   NR XP_009522141.1 67593 g4499 i0 71.9 0.446511627906977 32 9 44.7 0 97 2 30 61 XP_009522141.1 hypothetical protein PHYSODRAFT_558163 [Phytophthora sojae] diamond 96 52 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
27049879 27049879 PRJNA658591_S_NODE_7602_length_178_cov_1.612403_g7539_i0 PRJNA658591 7602 178 1.612403 2.87007734 Phytophthora megakarya 4795 SAR_Eukaryotes SAR_Eukaryotes 42 0.0293   NR OWZ14886.1 4795 g7539 i0 46.8 0.792134831460674 47 23 79.2 1 2 142 174 218 OWZ14886.1 hypothetical protein PHMEG_00011554 [Phytophthora megakarya] diamond 141 42 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora megakarya
27124841 27124841 PRJNA658591_S_NODE_4662_length_213_cov_2.817073_g4599_i0 PRJNA658591 4662 213 2.817073 6.00036549 root 1 Root_unresolved Root_unresolved 50.1 6.47e-5   NR OQR90235.1 1202772 g4599 i0 71.9 2.2112676056338 32 9 45.1 0 212 117 633 664 OQR90235.1 long-chain-fatty-acid-CoA ligase [Achlya hypogyna] diamond 471 50.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27283294 27283294 PRJNA658591_S_NODE_6523_length_188_cov_1.352518_g6460_i0 PRJNA658591 6523 188 1.352518 2.54273384 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 80.9 6.48e-16   NR OQR90711.1 74557 g6460 i0 61 2.74468085106383 59 23 94.1 0 178 2 607 665 OQR90711.1 coatomer subunit gamma [Thraustotheca clavata] diamond 516 81.6 0.991421568627451 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
27883195 27883195 PRJNA658591_S_NODE_10345_length_162_cov_0.920354_g10282_i0 PRJNA658591 10345 162 0.920354 1.49097348 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 101 3.0199999999999995e-23   NR KUF86801.1 4792 g10282 i0 96.3 5 54 2 100 0 162 1 536 589 KUF86801.1 ATP-binding Cassette (ABC) Superfamily [Phytophthora nicotianae] diamond 810 101 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
27914673 27914673 PRJNA658591_S_NODE_2005_length_297_cov_4.052419_g1942_i0 PRJNA658591 2005 297 4.052419 12.03568443 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 153 5.46e-41   NR RHY25645.1 157072 g1942 i0 76.3 3.93939393939394 97 23 98 0 4 294 267 363 RHY25645.1 hypothetical protein DYB32_008180 [Aphanomyces invadans] diamond 1170 154 0.993506493506494 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
27934252 27934252 PRJNA658591_S_NODE_6985_length_183_cov_2.455224_g6922_i0 PRJNA658591 6985 183 2.455224 4.49305992 Globisporangium splendens 82926 SAR_Eukaryotes SAR_Eukaryotes 75.9 1.35e-15   NR KAF1334804.1 82926 g6922 i0 66.7 2.32786885245902 48 15 78.7 1 38 181 1 47 KAF1334804.1 Nucleoredoxin, partial [Globisporangium splendens] diamond 426 75.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
27977918 27977918 PRJNA658591_S_NODE_10565_length_160_cov_2.720721_g10502_i0 PRJNA658591 10565 160 2.720721 4.3531536 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 61.2 3.62e-9   NR XP_008880042.1 157072 g10502 i0 55.1 7.7625 49 22 91.9 0 147 1 827 875 XP_008880042.1 hypothetical protein H310_14082 [Aphanomyces invadans] diamond 1242 61.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
28167534 28167534 PRJNA658591_S_NODE_5825_length_196_cov_2.476190_g5762_i0 PRJNA658591 5825 196 2.47619 4.8533324 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 79 3.53e-15   NR DAZ99033.1 4803 g5762 i0 55.7 20.219387755102 61 27 93.4 0 183 1 1359 1419 DAZ99033.1 TPA: hypothetical protein N0F65_010919, partial [Lagenidium giganteum] diamond 3963 79 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
28198809 28198809 PRJNA658591_S_NODE_9566_length_165_cov_2.284483_g9503_i0 PRJNA658591 9566 165 2.284483 3.76939695 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 80.1 8.58e-16   NR RHY36540.1 112090 g9503 i0 86 4.69090909090909 43 6 78.2 0 5 133 1492 1534 RHY36540.1 hypothetical protein DYB38_010883, partial [Aphanomyces astaci] diamond 774 80.5 0.995031055900621 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
28956998 28956998 PRJNA658591_S_NODE_9668_length_165_cov_0.896552_g9605_i0 PRJNA658591 9668 165 0.896552 1.4793108 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 71.6 8.22e-13   NR TMW66475.1 41045 g9605 i0 64.2 1.92727272727273 53 19 96.4 0 2 160 613 665 TMW66475.1 hypothetical protein Poli38472_004240 [Pythium oligandrum] diamond 318 71.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29114720 29114720 PRJNA658591_S_NODE_7188_length_181_cov_3.681818_g7125_i0 PRJNA658591 7188 181 3.681818 6.66409058 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 105 9.6e-25   NR KAG1692915.1 4784 g7125 i0 81.7 11.9337016574586 60 11 99.4 0 2 181 78 137 KAG1692915.1 hypothetical protein DVH05_024202 [Phytophthora capsici] diamond 2160 106 0.990566037735849 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
29134216 29134216 PRJNA658591_S_NODE_4449_length_217_cov_1.238095_g4386_i0 PRJNA658591 4449 217 1.238095 2.68666615 Phytophthora fragariaefolia 1490495 SAR_Eukaryotes SAR_Eukaryotes 54.7 1.34e-6   NR GMF45724.1 1490495 g4386 i0 75.6 0.566820276497696 41 7 55.3 2 145 26 221 259 GMF45724.1 unnamed protein product [Phytophthora fragariaefolia] diamond 123 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
29146589 29146589 PRJNA658591_S_NODE_11409_length_153_cov_2.461538_g11346_i0 PRJNA658591 11409 153 2.461538 3.76615314 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 107 7.3e-26   NR TMW54960.1 41045 g11346 i0 88.2 2 51 6 100 0 1 153 32 82 TMW54960.1 hypothetical protein Poli38472_014731 [Pythium oligandrum] diamond 306 107 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29367329 29367329 PRJNA658591_S_NODE_9769_length_164_cov_2.017391_g9706_i0 PRJNA658591 9769 164 2.017391 3.30852124 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 85.1 1.71e-18   NR POM78049.1 4796 g9706 i0 71.7 6.80487804878049 53 15 97 0 5 163 115 167 POM78049.1 Chaperonin GroL, partial [Phytophthora palmivora] diamond 1116 85.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
29556521 29556521 PRJNA658591_S_NODE_3870_length_228_cov_3.558659_g3807_i0 PRJNA658591 3870 228 3.558659 8.11374252 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 52.4 1.77e-6   NR KAE8904518.1 53985 g3807 i0 78.1 1.26315789473684 32 7 42.1 0 27 122 82 113 KAE8904518.1 hypothetical protein PF003_g11576 [Phytophthora fragariae] diamond 288 52.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
29619420 29619420 PRJNA658591_S_NODE_8170_length_173_cov_3.500000_g8107_i0 PRJNA658591 8170 173 3.5 6.055 root 1 Root_unresolved Root_unresolved 57.8 4.04e-8   NR RHY11550.1 112090 g8107 i0 46.2 7.42196531791908 52 28 90.2 0 17 172 100 151 RHY11550.1 hypothetical protein DYB36_006149, partial [Aphanomyces astaci] diamond 1284 58.2 0.993127147766323 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
29745856 29745856 PRJNA658591_S_NODE_6790_length_185_cov_2.000000_g6727_i0 PRJNA658591 6790 185 2 3.7 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0127   NR POM65556.1 4796 g6727 i0 46.3 1.76756756756757 54 25 87.6 1 164 3 424 473 POM65556.1 AP-2 complex subunit alpha, partial [Phytophthora palmivora] diamond 327 43.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
30207460 30207460 PRJNA658591_S_NODE_4892_length_209_cov_2.318750_g4829_i0 PRJNA658591 4892 209 2.31875 4.8461875 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 115 3.81e-30   NR GLD98854.1 114742 g4829 i0 75 1.83732057416268 68 17 97.6 0 4 207 49 116 GLD98854.1 hypothetical protein PINS_up007572 [Pythium insidiosum] diamond 384 115 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30283570 30283570 PRJNA658591_S_NODE_6892_length_184_cov_1.718519_g6829_i0 PRJNA658591 6892 184 1.718519 3.16207496 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 70.1 3.91e-12   NR RHZ30591.1 112090 g6829 i0 51.7 4.77717391304348 60 28 96.2 1 181 5 1292 1351 RHZ30591.1 hypothetical protein DYB26_006342 [Aphanomyces astaci] diamond 879 70.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
30315248 30315248 PRJNA658591_S_NODE_10332_length_162_cov_0.920354_g10269_i0 PRJNA658591 10332 162 0.920354 1.49097348 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 96.7 1.03e-21   NR KAF1317585.1 82926 g10269 i0 81.5 11.8333333333333 54 10 100 0 162 1 271 324 KAF1317585.1 Succinyl coa transferase, partial [Globisporangium splendens] diamond 1917 96.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
31041767 31041767 PRJNA658591_S_NODE_8835_length_169_cov_0.866667_g8772_i0 PRJNA658591 8835 169 0.866667 1.46466723 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 88.6 9.62e-19   NR CCI44225.1 65357 g8772 i0 75 4.95266272189349 56 14 99.4 0 1 168 57 112 CCI44225.1 unnamed protein product [Albugo candida] diamond 837 89 0.995505617977528 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32906031 32906031 PRJNA658591_S_NODE_1200_length_374_cov_4.046154_g1137_i0 PRJNA658591 1200 374 4.046154 15.13261596 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 190 8.52e-56   NR XP_012194490.1 695850 g1137 i0 72.7 5.82352941176471 121 33 97.1 0 372 10 39 159 XP_012194490.1 hypothetical protein SPRG_00887 [Saprolegnia parasitica CBS 223.65] diamond 2178 190 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;