RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA658591" and tax_phylum = "Arthropoda"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA658591 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15928415 15928415 PRJNA658591_S_NODE_7313_length_180_cov_3.572519_g7250_i0 PRJNA658591 7313 180 3.5725189999999998 6.4305342 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 86.7 5.34e-18   NR XP_054279391.1 74068 g7250 i0 67.2 33.9166666666667 58 19 96.7 0 5 178 413 470 XP_054279391.1 unconventional myosin-Va isoform X2 [Macrosteles quadrilineatus] diamond 6105 86.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Cicadellidae Macrosteles Macrosteles quadrilineatus
28344626 28344626 PRJNA658591_S_NODE_7866_length_176_cov_1.228346_g7803_i0 PRJNA658591 7866 176 1.228346 2.16188896 Cyamophila willieti 2604842 Arthropoda Arthropoda 66.2 7.71e-11   NR KAL1459258.1 2604842 g7803 i0 53.8 0.886363636363636 52 24 88.6 0 176 21 39 90 KAL1459258.1 hypothetical protein WDU94_011261 [Cyamophila willieti] diamond 156 66.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Psyllidae Cyamophila Cyamophila willieti
28881338 28881338 PRJNA658591_S_NODE_5668_length_198_cov_1.744966_g5605_i0 PRJNA658591 5668 198 1.744966 3.45503268 Acanthoscelides obtectus 200917 Arthropoda Arthropoda 65.9 1.37e-10   NR CAH1965250.1 200917 g5605 i0 53.8 1.42424242424242 52 23 77.3 1 45 197 66 117 CAH1965250.1 unnamed protein product [Acanthoscelides obtectus] diamond 282 65.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Chrysomelidae Acanthoscelides Acanthoscelides obtectus
29650985 29650985 PRJNA658591_S_NODE_6330_length_190_cov_1.106383_g6267_i0 PRJNA658591 6330 190 1.106383 2.1021277 root 1 Root_unresolved Root_unresolved 106 5.53e-25   NR XP_054715256.1 327109 g6267 i0 69.4 13.7052631578947 62 19 97.9 0 188 3 423 484 XP_054715256.1 ribonucleoside-diphosphate reductase large subunit-like [Uloborus diversus] diamond 2604 107 0.990654205607477 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Uloboridae Uloborus Uloborus diversus
29745857 29745857 PRJNA658591_S_NODE_9630_length_165_cov_1.258621_g9567_i0 PRJNA658591 9630 165 1.258621 2.07672465 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.1 6.23e-16   NR XP_023212881.1 218467 g9567 i0 73.6 4.85454545454545 53 14 96.4 0 7 165 209 261 XP_023212881.1 inosine-5'-monophosphate dehydrogenase 2-like [Centruroides sculpturatus] diamond 801 80.5 0.995031055900621 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Scorpiones Buthidae Centruroides Centruroides sculpturatus
30251738 30251738 PRJNA658591_S_NODE_1132_length_382_cov_4.702703_g1069_i0 PRJNA658591 1132 382 4.702703 17.96432546 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 155 8.12e-46   NR KAH8020767.1 6941 g1069 i0 60 20.4502617801047 115 46 90.3 0 345 1 1 115 KAH8020767.1 hypothetical protein HPB51_003424 [Rhipicephalus microplus] diamond 7812 155 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Ixodida Ixodidae Rhipicephalus Rhipicephalus microplus
30788692 30788692 PRJNA658591_S_NODE_2994_length_251_cov_6.366337_g2931_i0 PRJNA658591 2994 251 6.366337 15.97950587 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.5 1.08e-9   NR XP_014238573.1 7493 g2931 i0 62.8 2.2589641434263 43 16 51.4 0 247 119 217 259 XP_014238573.1 40S ribosomal protein S4 [Trichogramma pretiosum] diamond 567 63.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hymenoptera Trichogrammatidae Trichogramma Trichogramma pretiosum
31515971 31515971 PRJNA658591_S_NODE_5256_length_204_cov_1.335484_g5193_i0 PRJNA658591 5256 204 1.335484 2.72438736 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 5.67e-5   NR CAB4065159.1 72036 g5193 i0 48 4.83823529411765 50 26 73.5 0 8 157 396 445 CAB4065159.1 unnamed protein product [Lepeophtheirus salmonis] diamond 987 50.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Hexanauplia Siphonostomatoida Caligidae Lepeophtheirus Lepeophtheirus salmonis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;