RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA657860" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA657860 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27460733 27460733 PRJNA657860_P_NODE_3503_length_157_cov_1.541667_g3447_i0 PRJNA657860 3503 157 1.541667 2.42041719 Testicularia cyperi 1882483 Fungi Fungi 42.4 0.00997   NR PWZ00696.1 1882483 g3447 i0 41.2 0.974522292993631 51 30 97.5 0 1 153 80 130 PWZ00696.1 hypothetical protein BCV70DRAFT_99658 [Testicularia cyperi] diamond 153 42.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Anthracoideaceae Testicularia Testicularia cyperi
30492168 30492168 PRJNA657860_P_NODE_3273_length_163_cov_1.182540_g3217_i0 PRJNA657860 3273 163 1.18254 1.9275402 Malassezia arunalokei 1514897 Fungi Fungi 96.7 1.24e-21   NR WFD16437.1 1514897 g3217 i0 98.1 0.975460122699387 53 1 97.5 0 3 161 2519 2571 WFD16437.1 hypothetical protein MARU1_002474 [Malassezia arunalokei] diamond 159 96.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
30934555 30934555 PRJNA657860_P_NODE_2074_length_211_cov_1.270115_g2018_i0 PRJNA657860 2074 211 1.270115 2.67994265 Malassezia arunalokei 1514897 Fungi Fungi 91.7 1.44e-19   NR WFD16437.1 1514897 g2018 i0 71 0.981042654028436 69 20 98.1 0 209 3 935 1003 WFD16437.1 hypothetical protein MARU1_002474 [Malassezia arunalokei] diamond 207 91.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
32168019 32168019 PRJNA657860_P_NODE_1378_length_278_cov_1.535270_g1322_i0 PRJNA657860 1378 278 1.53527 4.2680506 Lentinus brumalis 2498619 Fungi Fungi 41.6 0.0194   NR RDX47954.1 2498619 g1322 i0 44.1 0.636690647482014 59 32 62.6 1 272 99 4 62 RDX47954.1 hypothetical protein OH76DRAFT_1327085, partial [Lentinus brumalis] diamond 177 41.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Lentinus Lentinus brumalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;