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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA657343" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA657343 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1899419 1899419 PRJNA657343_P_NODE_782_length_653_cov_9.513245_g765_i0 PRJNA657343 782 653 9.513245 62.12148985 Mesorhabditis spiculigera 96644 Nematoda Nematoda 293 2.83e-98   NR CAJ0586563.1 96644 g765 i0 81 6.19754977029096 168 32 77.2 0 6 509 4 171 CAJ0586563.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 4047 293 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
11363810 11363810 PRJNA657343_P_NODE_20449_length_206_cov_1.229299_g20425_i0 PRJNA657343 20449 206 1.229299 2.53235594 Opisthokonta 33154 Nematoda Nematoda 84.3 6.95e-18   NR KHN80245.1 6265 g20425 i0 77.8 106.179611650485 45 10 65.5 0 3 137 199 243 KHN80245.1 ADP-ribosylation factor 1-like 2 [Toxocara canis] diamond 21873 85.1 0.990599294947121 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
18475182 18475182 PRJNA657343_P_NODE_20595_length_205_cov_2.128205_g20571_i0 PRJNA657343 20595 205 2.128205 4.36282025 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 105 4.6800000000000005e-27   NR XP_024505625.1 34506 g20571 i0 84.6 303.512195121951 65 10 95.1 0 195 1 45 109 XP_024505625.1 Histone H2A.v [Strongyloides ratti] diamond 62220 105 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
23575696 23575696 PRJNA657343_P_NODE_29439_length_180_cov_1.793893_g29415_i0 PRJNA657343 29439 180 1.793893 3.2290074 Caenorhabditis sp. 36 PRJEB53466 2970133 Nematoda Nematoda 101 2.45e-23   NR CAI2356785.1 2970133 g29415 i0 80.7 6.81666666666667 57 11 95 0 174 4 388 444 CAI2356785.1 unnamed protein product [Caenorhabditis sp. 36 PRJEB53466] diamond 1227 101 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis sp. 36 PRJEB53466
26764827 26764827 PRJNA657343_P_NODE_37061_length_167_cov_3.449153_g37037_i0 PRJNA657343 37061 167 3.449153 5.76008551 Mesorhabditis spiculigera 96644 Nematoda Nematoda 72.4 1.26e-13   NR CAJ0575478.1 96644 g37037 i0 66.7 3.88023952095808 54 18 97 0 166 5 115 168 CAJ0575478.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 648 72.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
27314999 27314999 PRJNA657343_P_NODE_25263_length_190_cov_1.780142_g25239_i0 PRJNA657343 25263 190 1.780142 3.3822698 Metazoa 33208 Nematoda Nematoda 46.2 9.88e-4   NR KAI1694708.1 166010 g25239 i0 40 2.35263157894737 50 28 78.9 1 189 40 103 150 KAI1694708.1 arrestin domain-containing protein 17 [Ditylenchus destructor] diamond 447 46.6 0.991416309012876 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
27883190 27883190 PRJNA657343_P_NODE_10445_length_264_cov_0.916279_g10421_i0 PRJNA657343 10445 264 0.916279 2.41897656 Caenorhabditis 6237 Nematoda Nematoda 54.3 4.16e-6   NR XP_003094480.2 31234 g10421 i0 40.2 3.875 92 39 95.5 4 252 1 220 303 XP_003094480.2 hypothetical protein GCK72_003644 [Caenorhabditis remanei] diamond 1023 54.7 0.992687385740402 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
28249781 28249781 PRJNA657343_P_NODE_15346_length_229_cov_1.377778_g15322_i0 PRJNA657343 15346 229 1.377778 3.15511162 Meloidogyne enterolobii 390850 Nematoda Nematoda 48.9 2e-4   NR CAK5044631.1 390850 g15322 i0 43.4 2.77729257641921 53 27 68.1 2 209 54 269 319 CAK5044631.1 unnamed protein product [Meloidogyne enterolobii] diamond 636 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28249784 28249784 PRJNA657343_P_NODE_21586_length_201_cov_4.335526_g21562_i0 PRJNA657343 21586 201 4.335526 8.71440726 Mesorhabditis belari 2138241 Nematoda Nematoda 43.1 0.00522   NR CAJ0963498.1 2138241 g21562 i0 54.3 0.522388059701492 35 14 52.2 2 175 71 25 57 CAJ0963498.1 unnamed protein product, partial [Mesorhabditis belari] diamond 105 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
28420219 28420219 PRJNA657343_P_NODE_27406_length_185_cov_1.485294_g27382_i0 PRJNA657343 27406 185 1.485294 2.7477939 Metazoa 33208 Nematoda Nematoda 92 7.4e-20   NR XP_002632601.2 6238 g27382 i0 80.7 8.65945945945946 57 11 92.4 0 3 173 930 986 XP_002632601.2 Protein CBR-HHAT-2 [Caenorhabditis briggsae] diamond 1602 92 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
28534273 28534273 PRJNA657343_P_NODE_19887_length_208_cov_1.257862_g19863_i0 PRJNA657343 19887 208 1.257862 2.61635296 Steinernema hermaphroditum 289476 Nematoda Nematoda 46.6 0.00106   NR KAK0403087.1 289476 g19863 i0 38.2 2.94230769230769 68 24 98.1 1 205 2 980 1029 KAK0403087.1 hypothetical protein QR680_016712 [Steinernema hermaphroditum] diamond 612 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum
28565629 28565629 PRJNA657343_P_NODE_22647_length_198_cov_1.322148_g22623_i0 PRJNA657343 22647 198 1.322148 2.61785304 Cercopithifilaria johnstoni 2874296 Nematoda Nematoda 47 6.88e-4   NR CAG9537242.1 2874296 g22623 i0 38.7 1.90909090909091 62 38 93.9 0 192 7 496 557 CAG9537242.1 unnamed protein product [Cercopithifilaria johnstoni] diamond 378 47 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Cercopithifilaria Cercopithifilaria johnstoni
28704318 28704318 PRJNA657343_P_NODE_32887_length_173_cov_1.225806_g32863_i0 PRJNA657343 32887 173 1.225806 2.12064438 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62 2.31e-9   NR KAL3107838.1 157864 g32863 i0 51.8 4.85549132947977 56 27 97.1 0 4 171 581 636 KAL3107838.1 hypothetical protein niasHT_017070 [Heterodera trifolii] diamond 840 62 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
28786479 28786479 PRJNA657343_P_NODE_25087_length_191_cov_0.964789_g25063_i0 PRJNA657343 25087 191 0.964789 1.84274699 Necator americanus 51031 Nematoda Nematoda 72 4.98e-13   NR XP_064061713.1 51031 g25063 i0 59.4 4.71204188481675 64 20 91.1 1 191 18 203 266 XP_064061713.1 hypothetical protein RB195_015223 [Necator americanus] diamond 900 72 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
29355132 29355132 PRJNA657343_P_NODE_37669_length_167_cov_0.881356_g37645_i0 PRJNA657343 37669 167 0.881356 1.47186452 Pristionchus fissidentatus 1538716 Nematoda Nematoda 41.2 0.0469   NR GMT33618.1 1538716 g37645 i0 47.4 0.682634730538922 38 20 68.3 0 121 8 347 384 GMT33618.1 hypothetical protein PFISCL1PPCAC_24915, partial [Pristionchus fissidentatus] diamond 114 41.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30492153 30492153 PRJNA657343_P_NODE_38193_length_167_cov_0.881356_g38169_i0 PRJNA657343 38193 167 0.881356 1.47186452 Dracunculus medinensis 318479 Nematoda Nematoda 47.4 3.09e-4   NR VDN56231.1 318479 g38169 i0 50 8.47904191616766 48 22 84.4 2 23 163 1 47 VDN56231.1 unnamed protein product [Dracunculus medinensis] diamond 1416 47.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
30523656 30523656 PRJNA657343_P_NODE_10093_length_267_cov_1.834862_g10069_i0 PRJNA657343 10093 267 1.834862 4.89908154 Mesorhabditis belari 2138241 Nematoda Nematoda 100 1.81e-22   NR CAJ0941995.1 2138241 g10069 i0 57.1 0.943820224719101 84 35 94.4 1 14 265 429 511 CAJ0941995.1 unnamed protein product, partial [Mesorhabditis belari] diamond 252 100 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
31250371 31250371 PRJNA657343_P_NODE_2415_length_453_cov_2.259901_g2392_i0 PRJNA657343 2415 453 2.259901 10.23735153 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 115 6.33e-29   NR CAD5222505.1 6326 g2392 i0 52.1 2.42384105960265 119 52 78.8 1 387 31 7 120 CAD5222505.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1098 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31357663 31357663 PRJNA657343_P_NODE_42196_length_163_cov_4.263158_g42172_i0 PRJNA657343 42196 163 4.263158 6.94894754 Metazoa 33208 Nematoda Nematoda 60.5 6.73e-9   NR CAD5234365.1 6326 g42172 i0 54.2 7.95092024539877 48 22 88.3 0 149 6 348 395 CAD5234365.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 1296 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
31579058 31579058 PRJNA657343_P_NODE_13516_length_240_cov_1.298429_g13492_i0 PRJNA657343 13516 240 1.298429 3.1162296 Rhabditida 6236 Nematoda Nematoda 95.9 6.620000000000001e-21   NR KAL3112975.1 157864 g13492 i0 56.4 39 78 34 97.5 0 3 236 323 400 KAL3112975.1 hypothetical protein niasHT_013440 [Heterodera trifolii] diamond 9360 96.3 0.995846313603323 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
31673720 31673720 PRJNA657343_P_NODE_3857_length_382_cov_1.756757_g3834_i0 PRJNA657343 3857 382 1.756757 6.71081174 Opisthokonta 33154 Nematoda Nematoda 130 4.27e-33   NR KRX89142.1 6337 g3834 i0 52.1 10.1073298429319 121 58 95 0 17 379 115 235 KRX89142.1 Stress-induced-phosphoprotein 1, partial [Trichinella pseudospiralis] diamond 3861 131 0.99236641221374 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
31705476 31705476 PRJNA657343_P_NODE_13637_length_239_cov_2.057895_g13613_i0 PRJNA657343 13637 239 2.057895 4.91836905 Caenorhabditis 6237 Nematoda Nematoda 110 1.9000000000000003e-28   NR PIC47414.1 1611254 g13613 i0 66.7 9.58995815899582 75 25 94.1 0 228 4 20 94 PIC47414.1 hypothetical protein B9Z55_006783 [Caenorhabditis nigoni] diamond 2292 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis nigoni
32685597 32685597 PRJNA657343_P_NODE_42140_length_164_cov_0.860870_g42116_i0 PRJNA657343 42140 164 0.86087 1.4118268 Caenorhabditis 6237 Nematoda Nematoda 70.5 1.11e-12   NR ULT95350.1 6238 g42116 i0 52.9 1.86585365853659 51 24 93.3 0 10 162 161 211 ULT95350.1 hypothetical protein L3Y34_004225, partial [Caenorhabditis briggsae] diamond 306 70.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;