RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA657343" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA657343 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13376970 13376970 PRJNA657343_P_NODE_18851_length_212_cov_1.625767_g18827_i0 PRJNA657343 18851 212 1.625767 3.44662604 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 64.7 1e-10   NR KAK1443023.1 33632 g18827 i0 49.2 9.22641509433962 61 31 86.3 0 12 194 84 144 KAK1443023.1 p-loop containing nucleoside triphosphate hydrolase like protein [Babesia gibsoni] diamond 1956 64.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
28439488 28439488 PRJNA657343_P_NODE_38986_length_166_cov_0.888889_g38962_i0 PRJNA657343 38986 166 0.888889 1.47555574 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 52.8 1.99e-6   NR XP_026191109.1 88456 g38962 i0 61.8 1.8433734939759 34 13 61.4 0 106 5 3 36 XP_026191109.1 40S ribosomal protein S5 [Cyclospora cayetanensis] diamond 306 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
28660473 28660473 PRJNA657343_P_NODE_34127_length_170_cov_2.413223_g34103_i0 PRJNA657343 34127 170 2.413223 4.1024791 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 69.7 2.19e-12   NR XP_028866265.1 189622 g34103 i0 56.4 4.85294117647059 55 23 97.1 1 5 169 203 256 XP_028866265.1 TATA-box binding protein [Babesia ovata] diamond 825 69.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
29935766 29935766 PRJNA657343_P_NODE_36751_length_168_cov_0.873950_g36727_i0 PRJNA657343 36751 168 0.87395 1.468236 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.4 4.05e-6   NR CAL7865245.1 1344799 g36727 i0 40 7.39285714285714 55 33 98.2 0 166 2 44 98 CAL7865245.1 unnamed protein product [Sarcocystis calchasi] diamond 1242 52.8 0.992424242424242 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
30283559 30283559 PRJNA657343_P_NODE_10652_length_262_cov_1.516432_g10628_i0 PRJNA657343 10652 262 1.516432 3.97305184 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 85.5 1.13e-17   NR XP_002365362.1 508771 g10628 i0 58.3 3.3206106870229 72 29 81.3 1 23 235 217 288 XP_002365362.1 RNA recognition motif-containing protein [Toxoplasma gondii ME49] diamond 870 85.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
31186914 31186914 PRJNA657343_P_NODE_8395_length_286_cov_2.253165_g8371_i0 PRJNA657343 8395 286 2.253165 6.4440519 Plasmodium ovale 36330 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0248   NR SCP06112.1 36330 g8371 i0 32.9 0.765734265734266 73 39 70.3 2 85 285 257 325 SCP06112.1 inner membrane complex suture component, putative [Plasmodium ovale] diamond 219 43.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
32085050 32085050 PRJNA657343_P_NODE_36358_length_168_cov_0.873950_g36334_i0 PRJNA657343 36358 168 0.87395 1.468236 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99 7.599999999999998e-24   NR GFE52702.1 5869 g36334 i0 87.3 13.75 55 7 98.2 0 168 4 166 220 GFE52702.1 ribosome biogenesis related protein NSA2 [Babesia ovis] diamond 2310 99 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
32528299 32528299 PRJNA657343_P_NODE_6819_length_309_cov_2.646154_g6795_i0 PRJNA657343 6819 309 2.646154 8.17661586 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.8 2.54e-17   NR XP_067068314.1 117008 g6795 i0 43.9 6.70873786407767 98 49 95.1 1 16 309 46 137 XP_067068314.1 translationally-controlled tumor protein [Cryptosporidium andersoni] diamond 2073 83.6 0.990430622009569 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
32748647 32748647 PRJNA657343_P_NODE_28580_length_182_cov_1.902256_g28556_i0 PRJNA657343 28580 182 1.902256 3.46210592 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 91.7 5.84e-22   NR XP_012766397.1 5866 g28556 i0 66.1 7.73076923076923 59 20 97.3 0 180 4 70 128 XP_012766397.1 40S ribosomal protein S15, putative [Babesia bigemina] diamond 1407 92 0.996739130434783 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;