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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA657343" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 29 ✖

bioproject 1

  • PRJNA657343 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1899438 1899438 PRJNA657343_P_NODE_882_length_628_cov_9.820380_g864_i0 PRJNA657343 882 628 9.82038 61.6719864 Eukaryota 2759 Plants Plants 236 1.6999999999999998e-69   NR PRW32846.1 3076 g864 i0 69.4 40.2611464968153 183 56 87.4 0 22 570 1 183 PRW32846.1 60S ribosomal L19-2 isoform A [Chlorella sorokiniana] diamond 25284 236 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
3174085 3174085 PRJNA657343_P_NODE_4983_length_347_cov_1.768456_g4960_i0 PRJNA657343 4983 347 1.768456 6.13654232 Helicosporidium sp. ATCC 5 1907511 Plants Plants 174 5.16e-48   NR KDD73706.1 1291522 g4960 i0 72.5 1.03746397694524 120 27 98.6 2 2 343 596 715 KDD73706.1 AAA+ ATPase, partial [Helicosporidium sp. ATCC 50920] diamond 360 174 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ATCC 50920
7001841 7001841 PRJNA657343_P_NODE_46606_length_155_cov_3.669811_g46582_i0 PRJNA657343 46606 155 3.669811 5.68820705 Coccomyxa viridis 1274662 Plants Plants 94.7 5.4e-21   NR CAK0753364.1 1274662 g46582 i0 88 17.341935483871 50 6 96.8 0 152 3 361 410 CAK0753364.1 AAA ATPase, CDC48 sub [Coccomyxa viridis] diamond 2688 94.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
8276210 8276210 PRJNA657343_P_NODE_2307_length_459_cov_8.185366_g2284_i0 PRJNA657343 2307 459 8.185366 37.57082994 Raphidocelis subcapitata 307507 Plants Plants 213 4.7199999999999986e-68   NR GBG00329.1 307507 g2284 i0 70.1 1.91503267973856 147 42 94.8 1 13 447 1 147 GBG00329.1 60S ribosomal protein L27a [Raphidocelis subcapitata] diamond 879 213 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
8276433 8276433 PRJNA657343_P_NODE_42067_length_164_cov_0.904348_g42043_i0 PRJNA657343 42067 164 0.904348 1.48313072 root 1 Root_unresolved Root_unresolved 87 9.98e-20   NR WIA14882.1 3088 g42043 i0 88.6 99.7134146341463 44 5 80.5 0 164 33 138 181 WIA14882.1 hypothetical protein OEZ85_001599 [Tetradesmus obliquus] diamond 16353 87.8 0.990888382687927 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
10827188 10827188 PRJNA657343_P_NODE_22969_length_197_cov_1.033784_g22945_i0 PRJNA657343 22969 197 1.033784 2.03655448 Eukaryota 2759 Plants Plants 100 1.2800000000000001e-22   NR PNH07205.1 47790 g22945 i0 75.4 3.95939086294416 65 16 99 0 197 3 1573 1637 PNH07205.1 Pre-mRNA-splicing factor 8 [Tetrabaena socialis] diamond 780 101 0.99009900990099 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
12102649 12102649 PRJNA657343_P_NODE_5710_length_329_cov_2.732143_g5686_i0 PRJNA657343 5710 329 2.732143 8.98875047 Eukaryota 2759 Plants Plants 86.7 3.66e-17   NR KAG2489700.1 47281 g5686 i0 74.5 8.03343465045593 51 13 46.5 0 2 154 455 505 KAG2489700.1 hypothetical protein HYH03_011808 [Edaphochlamys debaryana] diamond 2643 87.4 0.991990846681922 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
19749867 19749867 PRJNA657343_P_NODE_25276_length_190_cov_1.702128_g25252_i0 PRJNA657343 25276 190 1.702128 3.2340432 Eukaryota 2759 Plants Plants 103 2.1499999999999998e-24   NR KAF5833444.1 3046 g25252 i0 78.7 4.81578947368421 61 13 96.3 0 5 187 309 369 KAF5833444.1 ribosomal protein L3 component of cytosolic 80S ribosome and 60S large subunit [Dunaliella salina] diamond 915 103 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
22300452 22300452 PRJNA657343_P_NODE_4438_length_362_cov_2.690096_g4415_i0 PRJNA657343 4438 362 2.690096 9.73814752 Prototheca wickerhamii 3111 Plants Plants 133 1.4e-36   NR KAK2078145.1 3111 g4415 i0 59.3 6.58839779005525 113 45 93.6 1 23 361 8 119 KAK2078145.1 60s acidic ribosomal protein P2 [Prototheca wickerhamii] diamond 2385 133 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
26903888 26903888 PRJNA657343_P_NODE_26841_length_186_cov_2.642336_g26817_i0 PRJNA657343 26841 186 2.642336 4.91474496 Picochlorum 249344 Plants Plants 110 2.39e-26   NR WPT15180.1 1470871 g26817 i0 86.7 4.83870967741935 60 7 96.8 1 184 5 255 313 WPT15180.1 Guanine nucleotide-binding protein subunit beta-like protein [Picochlorum sp. SENEW3] diamond 900 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. SENEW3
27175965 27175965 PRJNA657343_P_NODE_36862_length_168_cov_0.873950_g36838_i0 PRJNA657343 36862 168 0.87395 1.468236 [Myrmecia] bisecta 41462 Plants Plants 41.2 0.00825   NR KAK9817708.1 41462 g36838 i0 48.1 1.78571428571429 52 24 92.9 1 168 13 16 64 KAK9817708.1 hypothetical protein WJX72_000976 [[Myrmecia] bisecta] diamond 300 41.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
27839274 27839274 PRJNA657343_P_NODE_16444_length_223_cov_1.471264_g16420_i0 PRJNA657343 16444 223 1.471264 3.28091872 Micractinium conductrix 554055 Plants Plants 92.8 6.88e-20   NR PSC70049.1 554055 g16420 i0 64.3 0.94170403587444 70 24 92.8 1 10 216 143 212 PSC70049.1 26S proteasome regulatory subunit [Micractinium conductrix] diamond 210 92.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
28186548 28186548 PRJNA657343_P_NODE_9026_length_279_cov_1.352174_g9002_i0 PRJNA657343 9026 279 1.352174 3.77256546 Micractinium sp. CCAP 211/92 554058 Plants Plants 52.4 1.58e-5   NR KAL4448815.1 554058 g9002 i0 42 0.537634408602151 50 29 53.8 0 123 272 26 75 KAL4448815.1 hypothetical protein ABPG77_007532 [Micractinium sp. CCAP 211/92] diamond 150 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
28325203 28325203 PRJNA657343_P_NODE_35526_length_169_cov_0.866667_g35502_i0 PRJNA657343 35526 169 0.866667 1.46466723 Eukaryota 2759 Plants Plants 65.1 1.81e-10   NR XP_042919236.1 3055 g35502 i0 67.3 7.40236686390533 52 17 92.3 0 163 8 748 799 XP_042919236.1 uncharacterized protein CHLRE_12g540076v5 [Chlamydomonas reinhardtii] diamond 1251 65.5 0.993893129770992 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
29102545 29102545 PRJNA657343_P_NODE_12888_length_244_cov_2.251282_g12864_i0 PRJNA657343 12888 244 2.251282 5.49312808 Trebouxia sp. C 2796353 Plants Plants 67.8 5.78e-11   NR KAL3138957.1 3373145 g12864 i0 46.2 1.91803278688525 78 41 95.9 1 11 244 478 554 KAL3138957.1 hypothetical protein ABBQ32_005768 [Trebouxia sp. C0010 RCD-2024] diamond 468 67.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
29228932 29228932 PRJNA657343_P_NODE_24209_length_193_cov_1.402778_g24185_i0 PRJNA657343 24209 193 1.402778 2.70736154 Volvox reticuliferus 1737510 Plants Plants 62.8 1.19e-9   NR GIL84488.1 1737510 g24185 i0 55.1 2.47150259067358 49 22 76.2 0 190 44 167 215 GIL84488.1 hypothetical protein Vretifemale_13150 [Volvox reticuliferus] diamond 477 62.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
29228935 29228935 PRJNA657343_P_NODE_25809_length_189_cov_1.407143_g25785_i0 PRJNA657343 25809 189 1.407143 2.65950027 Auxenochlorella protothecoides 3075 Plants Plants 95.9 2.5600000000000003e-21   NR RMZ57166.1 3075 g25785 i0 60.7 2.87301587301587 61 24 96.8 0 184 2 122 182 RMZ57166.1 hypothetical protein APUTEX25_004000 [Auxenochlorella protothecoides] diamond 543 95.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
29304034 29304034 PRJNA657343_P_NODE_31849_length_175_cov_1.428571_g31825_i0 PRJNA657343 31849 175 1.428571 2.49999925 Eukaryota 2759 Plants Plants 87.8 1.39e-18   NR PRW59022.1 3076 g31825 i0 77.2 20.9828571428571 57 13 97.7 0 175 5 18 74 PRW59022.1 DEAD-box ATP-dependent RNA helicase 8 [Chlorella sorokiniana] diamond 3672 87.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
29638834 29638834 PRJNA657343_P_NODE_29650_length_180_cov_1.137405_g29626_i0 PRJNA657343 29650 180 1.137405 2.047329 Micractinium sp. CCAP 211/92 554058 Plants Plants 42.7 0.0168   NR KAL4420951.1 554058 g29626 i0 52.4 0.7 42 19 70 1 159 34 541 581 KAL4420951.1 hypothetical protein ABPG77_004580 [Micractinium sp. CCAP 211/92] diamond 126 42.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
29777574 29777574 PRJNA657343_P_NODE_20451_length_206_cov_1.216561_g20427_i0 PRJNA657343 20451 206 1.216561 2.50611566 Eukaryota 2759 Plants Plants 105 3.64e-26   NR KAK9817106.1 41462 g20427 i0 71.2 12.495145631068 66 19 96.1 0 202 5 8 73 KAK9817106.1 hypothetical protein WJX72_009622 [[Myrmecia] bisecta] diamond 2574 105 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30239335 30239335 PRJNA657343_P_NODE_36552_length_168_cov_0.873950_g36528_i0 PRJNA657343 36552 168 0.87395 1.468236 Chlorella variabilis 554065 Plants Plants 52.8 3.86e-6   NR XP_005847079.1 554065 g36528 i0 57.9 0.678571428571429 38 16 67.9 0 47 160 251 288 XP_005847079.1 hypothetical protein CHLNCDRAFT_134765 [Chlorella variabilis] diamond 114 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
30567186 30567186 PRJNA657343_P_NODE_32393_length_174_cov_1.224000_g32369_i0 PRJNA657343 32393 174 1.224 2.12976 root 1 Root_unresolved Root_unresolved 80.9 9.97e-18   NR AGB85025.1 3075 g32369 i0 64.3 4.82758620689655 56 20 96.6 0 169 2 5 60 AGB85025.1 eukaryotic translation elongation factor 1 alpha 2, partial [Auxenochlorella protothecoides] diamond 840 81.3 0.995079950799508 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
30902882 30902882 PRJNA657343_P_NODE_15194_length_230_cov_1.116022_g15170_i0 PRJNA657343 15194 230 1.116022 2.5668506 Bryopsis sp. KO-2 3115439 Plants Plants 94 2.29e-20   NR GMH38546.1 3041901 g15170 i0 54.7 0.978260869565217 75 31 93.9 1 11 226 177 251 GMH38546.1 hypothetical protein BSKO_06430 [Bryopsis sp. KO-2023] diamond 225 94 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
31693191 31693191 PRJNA657343_P_NODE_2457_length_450_cov_2.610973_g2434_i0 PRJNA657343 2457 450 2.610973 11.7493785 Edaphochlamys debaryana 47281 Plants Plants 71.6 1.82e-11   NR KAG2498060.1 47281 g2434 i0 43.8 0.64 96 48 61.3 3 276 1 157 250 KAG2498060.1 hypothetical protein HYH03_003821 [Edaphochlamys debaryana] diamond 288 71.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Edaphochlamys Edaphochlamys debaryana
32326369 32326369 PRJNA657343_P_NODE_20479_length_206_cov_0.936306_g20455_i0 PRJNA657343 20479 206 0.936306 1.92879036 Micractinium sp. CCAP 211/92 554058 Plants Plants 102 2.2399999999999998e-23   NR KAL4435482.1 554058 g20455 i0 72.1 4.95145631067961 68 19 99 0 3 206 737 804 KAL4435482.1 hypothetical protein ABPG77_006244 [Micractinium sp. CCAP 211/92] diamond 1020 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium sp. CCAP 211/92
32338470 32338470 PRJNA657343_P_NODE_36559_length_168_cov_0.873950_g36535_i0 PRJNA657343 36559 168 0.87395 1.468236 Eukaryota 2759 Plants Plants 41.6 0.0346   NR KAH7623499.1 1650286 g36535 i0 41 1.53571428571429 39 23 69.6 0 161 45 201 239 KAH7623499.1 putative Ribosomal lysine N-methyltransferase set10 [Chlorella desiccata (nom. nud.)] diamond 258 41.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
32389261 32389261 PRJNA657343_P_NODE_19579_length_209_cov_1.862500_g19555_i0 PRJNA657343 19579 209 1.8625 3.892625 Pleodorina starrii 330485 Plants Plants 56.6 3.05e-7   NR GLC40661.1 330485 g19555 i0 41.5 2.82775119617225 65 38 93.3 0 4 198 282 346 GLC40661.1 hypothetical protein PLESTM_001098600 [Pleodorina starrii] diamond 591 56.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
32452843 32452843 PRJNA657343_P_NODE_8639_length_283_cov_4.457265_g8615_i0 PRJNA657343 8639 283 4.457265 12.61405995 Pedinophyceae sp. YPF-7 765719 Plants Plants 75.9 2.8e-15   NR CAG9460866.1 765719 g8615 i0 54.1 0.901060070671378 85 38 90.1 1 283 29 39 122 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 255 75.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
32748648 32748648 PRJNA657343_P_NODE_30520_length_178_cov_1.186047_g30496_i0 PRJNA657343 30520 178 1.186047 2.11116366 Chlorophyta 3041 Plants Plants 85.9 5.68e-18   NR XP_002957430.1 3068 g30496 i0 68.4 16.3314606741573 57 18 96.1 0 178 8 42 98 XP_002957430.1 uncharacterized protein VOLCADRAFT_77582 [Volvox carteri f. nagariensis] diamond 2907 85.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;