RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA656952" and tax_phylum = "Uroviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA656952 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29039501 29039501 PRJNA656952_P_NODE_35588_length_248_cov_0.880000_g35401_i0 PRJNA656952 35588 248 0.88 2.1824 Caudoviricetes sp. 2832643 Viruses Viruses 54.3 2.15e-6   NR DAN86743.1 2832643 g35401 i0 40.3 0.870967741935484 72 41 84.7 1 38 247 115 186 DAN86743.1 MAG TPA: head to tail adaptor [Caudoviricetes sp.] diamond 216 54.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31155210 31155210 PRJNA656952_P_NODE_32575_length_250_cov_0.870056_g32388_i0 PRJNA656952 32575 250 0.870056 2.17514 Streptomyces phage BRock 1913591 Viruses Viruses 116 1.4899999999999998e-30   NR YP_009831862.1 1913591 g32388 i0 63.9 0.996 83 29 99.6 1 250 2 70 151 YP_009831862.1 tail tube protein [Streptomyces phage BRock] diamond 249 116 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Borockvirus Borockvirus brock

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;