RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA656952" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA656952 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27902397 27902397 PRJNA656952_P_NODE_31925_length_251_cov_0.865169_g31738_i0 PRJNA656952 31925 251 0.865169 2.17157419 Haliotis asinina 109174 Mollusca Mollusca 73.9 2.68e-14   NR XP_067677332.1 109174 g31738 i0 63.6 1.31474103585657 55 20 65.7 0 1 165 47 101 XP_067677332.1 2-iminobutanoate/2-iminopropanoate deaminase-like [Haliotis asinina] diamond 330 73.9 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
28483198 28483198 PRJNA656952_P_NODE_37266_length_246_cov_0.890173_g37079_i0 PRJNA656952 37266 246 0.890173 2.18982558 Metazoa 33208 Mollusca Mollusca 87.8 5.06e-18   NR XP_052788576.1 6604 g37079 i0 48.2 4.04878048780488 83 40 98.8 2 2 244 221 302 XP_052788576.1 glutaminase kidney isoform, mitochondrial-like [Mya arenaria] diamond 996 87.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Myida Myidae Mya Mya arenaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;