RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA656952" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 18 ✖

bioproject 1

  • PRJNA656952 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12101873 12101873 PRJNA656952_P_NODE_35250_length_248_cov_0.880000_g35063_i0 PRJNA656952 35250 248 0.88 2.1824 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 170 3.27e-50   NR MCD8561690.1 2026720 g35063 i0 100 1.98387096774194 82 0 99.2 0 248 3 70 151 MCD8561690.1 ribonucleotide-diphosphate reductase subunit beta [Candidatus Saccharibacteria bacterium] diamond 492 170 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
21025099 21025099 PRJNA656952_P_NODE_42297_length_242_cov_0.911243_g42110_i0 PRJNA656952 42297 242 0.911243 2.20520806 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 136 4.57e-38   NR HMH70408.1 2973664 g42110 i0 85 2.97520661157025 80 12 99.2 0 242 3 129 208 HMH70408.1 ABC transporter ATP-binding protein [Candidatus Saccharimonadales bacterium] diamond 720 136 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27681920 27681920 PRJNA656952_P_NODE_36044_length_247_cov_0.885057_g35857_i0 PRJNA656952 36044 247 0.885057 2.18609079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.5 9.76e-8   NR HYD93279.1 2053589 g35857 i0 42 0.838056680161943 69 40 83.8 0 40 246 1 69 HYD93279.1 endolytic transglycosylase MltG [Candidatus Paceibacterota bacterium] diamond 207 58.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27776467 27776467 PRJNA656952_P_NODE_25464_length_276_cov_1.369458_g25277_i0 PRJNA656952 25464 276 1.369458 3.77970408 Minisyncoccota bacterium 2053589 Bacteria Bacteria 53.9 5.57e-6   NR MEO6536130.1 2053589 g25277 i0 36.7 0.858695652173913 79 46 81.5 1 252 28 108 186 MEO6536130.1 alpha-1,2-fucosyltransferase [Candidatus Paceibacterota bacterium] diamond 237 53.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28313140 28313140 PRJNA656952_P_NODE_26786_length_270_cov_1.563452_g26599_i0 PRJNA656952 26786 270 1.563452 4.2213204 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 78.6 9.44e-15   NR HET7630299.1 2973664 g26599 i0 64.7 0.755555555555556 68 24 75.6 0 66 269 114 181 HET7630299.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 204 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28344590 28344590 PRJNA656952_P_NODE_23046_length_287_cov_1.429907_g22859_i0 PRJNA656952 23046 287 1.429907 4.10383309 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 67 1.44e-10   NR MBN9397617.1 2026720 g22859 i0 52.9 0.710801393728223 68 31 71.1 1 206 3 1 67 MBN9397617.1 DUF916 domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 204 67 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29367322 29367322 PRJNA656952_P_NODE_30929_length_251_cov_1.426966_g30742_i0 PRJNA656952 30929 251 1.426966 3.58168466 Bacteria 2 Bacteria Bacteria 68.6 3.42e-11   NR PIU75310.1 1974809 g30742 i0 44.3 2.71314741035857 79 44 94.4 0 2 238 553 631 PIU75310.1 MAG: hypothetical protein COS76_01435 [Candidatus Portnoybacteria bacterium CG06_land_8_20_14_3_00_39_12] diamond 681 68.9 0.995645863570392 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG06_land_8_20_14_3_00_39_12
29386706 29386706 PRJNA656952_P_NODE_42029_length_242_cov_1.343195_g41842_i0 PRJNA656952 42029 242 1.343195 3.2505319 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42.4 0.0477   NR MDA1190283.1 2026781 g41842 i0 36.5 0.644628099173554 52 32 63.2 1 153 1 145 196 MDA1190283.1 lysylphosphatidylglycerol synthase transmembrane domain-containing protein [Candidatus Poribacteria bacterium] diamond 156 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29923478 29923478 PRJNA656952_P_NODE_41711_length_243_cov_0.905882_g41524_i0 PRJNA656952 41711 243 0.905882 2.20129326 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 147 7.65e-41   NR OJU87421.1 1895829 g41524 i0 90.5 2.81481481481481 74 7 91.4 0 222 1 94 167 OJU87421.1 MAG: molecular chaperone DnaJ [Candidatus Saccharibacteria bacterium 49-20] diamond 684 147 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
30030486 30030486 PRJNA656952_P_NODE_43651_length_241_cov_0.916667_g43464_i0 PRJNA656952 43651 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 69.3 9.23e-12   NR OJU88037.1 1895829 g43464 i0 68.1 2.3402489626556 47 15 58.5 0 241 101 247 293 OJU88037.1 MAG: hypothetical protein BGO17_03625 [Candidatus Saccharibacteria bacterium 49-20] diamond 564 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
30366096 30366096 PRJNA656952_P_NODE_43572_length_241_cov_0.916667_g43385_i0 PRJNA656952 43572 241 0.916667 2.20916747 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 58.2 1.16e-7   NR UTX51373.1 2980174 g43385 i0 85.3 0.846473029045643 34 5 42.3 0 138 239 1 34 UTX51373.1 membrane protein insertase YidC [Candidatus Saccharibacteria bacterium TM7i] diamond 204 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
30472837 30472837 PRJNA656952_P_NODE_36853_length_247_cov_0.885057_g36666_i0 PRJNA656952 36853 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 154 3.499999999999999e-43   NR OYX53882.1 1970481 g36666 i0 90.2 1.9919028340081 82 8 99.6 0 246 1 215 296 OYX53882.1 MAG: prolyl-tRNA synthetase [Candidatus Saccharibacteria bacterium 32-50-13] diamond 492 155 0.993548387096774 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-50-13
30946836 30946836 PRJNA656952_P_NODE_33454_length_249_cov_1.312500_g33267_i0 PRJNA656952 33454 249 1.3125 3.268125 Pseudomonadati 3379134 Bacteria Bacteria 138 1.5e-36   NR OJU88171.1 1895829 g33267 i0 90.3 3.46987951807229 72 7 86.7 0 3 218 407 478 OJU88171.1 MAG: UDP-phosphate galactose phosphotransferase [Candidatus Saccharibacteria bacterium 49-20] diamond 864 139 0.992805755395683 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
31598530 31598530 PRJNA656952_P_NODE_35876_length_247_cov_1.655172_g35689_i0 PRJNA656952 35876 247 1.655172 4.08827484 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 137 2.83e-38   NR HMS92780.1 2026720 g35689 i0 85.4 0.995951417004049 82 12 99.6 0 246 1 59 140 HMS92780.1 alpha/beta hydrolase [Candidatus Saccharibacteria bacterium] diamond 246 137 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32041279 32041279 PRJNA656952_P_NODE_40958_length_243_cov_0.905882_g40771_i0 PRJNA656952 40958 243 0.905882 2.20129326 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 84.3 2.64e-18   NR NCC20010.1 2026720 g40771 i0 48.1 1 81 42 100 0 243 1 28 108 NCC20010.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 243 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32262978 32262978 PRJNA656952_P_NODE_34838_length_248_cov_0.880000_g34651_i0 PRJNA656952 34838 248 0.88 2.1824 Candidatus Microsaccharimonas sossegonensis 2506948 Bacteria Bacteria 47 0.00126   NR RWZ78535.1 2506948 g34651 i0 43.4 0.641129032258065 53 29 62.9 1 160 5 521 573 RWZ78535.1 MAG: hypothetical protein EOT05_02175 [Candidatus Microsaccharimonas sossegonensis] diamond 159 47 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Microsaccharimonas Candidatus Microsaccharimonas sossegonensis
32484321 32484321 PRJNA656952_P_NODE_23879_length_283_cov_1.466667_g23692_i0 PRJNA656952 23879 283 1.466667 4.15066761 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 77 2.01e-14   NR MBH1956228.1 2026720 g23692 i0 47.2 0.943462897526502 89 44 94.3 1 3 269 170 255 MBH1956228.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 267 77 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32641737 32641737 PRJNA656952_P_NODE_23940_length_283_cov_1.290476_g23753_i0 PRJNA656952 23940 283 1.290476 3.65204708 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 148 4.73e-44   NR HEY0965053.1 2973664 g23753 i0 84.9 0.911660777385159 86 13 91.2 0 8 265 1 86 HEY0965053.1 50S ribosomal protein L24 [Candidatus Saccharimonadales bacterium] diamond 258 148 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;