RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA645397" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA645397 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13373641 13373641 PRJNA645397_P_NODE_10971_length_162_cov_0.920354_g10898_i0 PRJNA645397 10971 162 0.920354 1.49097348 Schizophyllum commune Loenen D 1314666 Fungi Fungi 56.2 2.12e-7   NR KAI4524343.1 1314666 g10898 i0 86.7 0.555555555555556 30 4 55.6 0 27 116 1101 1130 KAI4524343.1 hypothetical protein K525DRAFT_194188 [Schizophyllum commune Loenen D] diamond 90 56.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Schizophyllaceae Schizophyllum Schizophyllum commune
28565578 28565578 PRJNA645397_P_NODE_10547_length_164_cov_0.904348_g10474_i0 PRJNA645397 10547 164 0.904348 1.48313072 Ceratobasidium sp. 414 2600205 Fungi Fungi 62.4 1.48e-9   NR KAG8739150.1 2600205 g10474 i0 56.6 0.969512195121951 53 23 97 0 4 162 61 113 KAG8739150.1 hypothetical protein FRC10_006097 [Ceratobasidium sp. 414] diamond 159 62.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Ceratobasidium Ceratobasidium sp. 414
28597314 28597314 PRJNA645397_P_NODE_8507_length_176_cov_1.338583_g8434_i0 PRJNA645397 8507 176 1.338583 2.35590608 Irpex rosettiformis 378272 Fungi Fungi 50.8 2.09e-5   NR KAI0085989.1 378272 g8434 i0 91.3 1.3125 23 2 39.2 0 31 99 285 307 KAI0085989.1 general substrate transporter [Irpex rosettiformis] diamond 231 50.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Irpicaceae Irpex Irpex rosettiformis
29260038 29260038 PRJNA645397_P_NODE_9389_length_168_cov_1.084034_g9316_i0 PRJNA645397 9389 168 1.084034 1.82117712 Phenoliferia sp. Uapishka_3 3038894 Fungi Fungi 62.4 1.54e-9   NR KAK4702147.1 3038894 g9316 i0 56.4 0.982142857142857 55 3 98.2 1 2 166 394 427 KAK4702147.1 amidase, partial [Phenoliferia sp. Uapishka_3] diamond 165 62.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Kriegeriales Kriegeriaceae Phenoliferia Phenoliferia sp. Uapishka_3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;