RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA643700" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA643700 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29935741 29935741 PRJNA643700_P_NODE_405011_length_166_cov_0.888889_g403455_i0 PRJNA643700 405011 166 0.888889 1.47555574 Fungi 4751 Fungi Fungi 42.7 0.0133   NR XP_069248715.1 911321 g403455 i0 85.7 3.03614457831325 21 3 38 0 165 103 380 400 XP_069248715.1 uncharacterized protein VTP21DRAFT_3836 [Calcarisporiella thermophila] diamond 504 42.7 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
30175939 30175939 PRJNA643700_P_NODE_287572_length_216_cov_2.407186_g286016_i0 PRJNA643700 287572 216 2.407186 5.19952176 Lichtheimia ramosa 688394 Fungi Fungi 42 0.0485   NR CDS07762.1 688394 g286016 i0 44.4 0.5 36 20 50 0 205 98 476 511 CDS07762.1 hypothetical protein LRAMOSA01711 [Lichtheimia ramosa] diamond 108 42 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ramosa
30366022 30366022 PRJNA643700_P_NODE_329432_length_195_cov_1.424658_g327876_i0 PRJNA643700 329432 195 1.424658 2.7780831 Cetraspora pellucida 1433469 Fungi Fungi 42.4 0.0112   NR CAG8511605.1 1433469 g327876 i0 52.6 0.584615384615385 38 18 58.5 0 144 31 23 60 CAG8511605.1 10620_t:CDS:2, partial [Cetraspora pellucida] diamond 114 42.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Cetraspora Cetraspora pellucida
30397712 30397712 PRJNA643700_P_NODE_273633_length_224_cov_2.674286_g272077_i0 PRJNA643700 273633 224 2.674286 5.99040064 Mucor plumbeus 97098 Fungi Fungi 43.1 0.0191   NR KAG2208180.1 97098 g272077 i0 65.4 1.48660714285714 26 9 34.8 0 209 132 150 175 KAG2208180.1 hypothetical protein INT46_005855 [Mucor plumbeus] diamond 333 43.5 0.990804597701149 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
32072814 32072814 PRJNA643700_P_NODE_394258_length_168_cov_0.873950_g392702_i0 PRJNA643700 394258 168 0.87395 1.468236 Paraglomus brasilianum 144538 Fungi Fungi 60.8 5.45e-9   NR CAG8498748.1 144538 g392702 i0 54.9 1.82142857142857 51 23 91.1 0 159 7 65 115 CAG8498748.1 2164_t:CDS:2 [Paraglomus brasilianum] diamond 306 60.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus brasilianum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;