RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA643700" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA643700 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27870843 27870843 PRJNA643700_P_NODE_287045_length_217_cov_1.005952_g285489_i0 PRJNA643700 287045 217 1.005952 2.18291584 Aspergillus lentulus narnavirus 1 2747489 Viruses Viruses 47.4 5.99e-4   NR BCH36645.1 2747489 g285489 i0 55.3 0.525345622119816 38 17 52.5 0 217 104 283 320 BCH36645.1 hypothetical protein [Aspergillus lentulus narnavirus 1] diamond 114 47.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Aspergillus lentulus narnavirus 1
27902321 27902321 PRJNA643700_P_NODE_353445_length_184_cov_1.155556_g351889_i0 PRJNA643700 353445 184 1.155556 2.12622304 Penicillium citrinum ourmia-like virus 1 2485924 Viruses Viruses 97.4 9.01e-22   NR YP_010797622.1 2485924 g351889 i0 73.3 0.978260869565217 60 16 97.8 0 182 3 117 176 YP_010797622.1 RNA-dependent RNA polymerase [Penicillium citrinum ourmia-like virus 1] diamond 180 97.4 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Magoulivirus Magoulivirus penicillii
28849561 28849561 PRJNA643700_P_NODE_398488_length_167_cov_0.881356_g396932_i0 PRJNA643700 398488 167 0.881356 1.47186452 Grapevine wood holobiome associated narna-like virus 6 3398663 Viruses Viruses 45.8 0.00105   NR XOD45342.1 3398663 g396932 i0 38.9 0.970059880239521 54 33 97 0 3 164 144 197 XOD45342.1 HP2 [Grapevine wood holobiome associated narna-like virus 6] diamond 162 45.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;