RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA643700" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJNA643700 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26954520 26954520 PRJNA643700_P_NODE_183982_length_294_cov_1.114286_g182426_i0 PRJNA643700 183982 294 1.114286 3.27600084 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 43.9 0.0253   NR MFH1473347.1 3121606 g182426 i0 37 0.469387755102041 46 22 39.8 1 177 61 93 138 MFH1473347.1 hypothetical protein [Candidatus Aenigmatarchaeota archaeon] diamond 138 43.9 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
32420905 32420905 PRJNA643700_P_NODE_117799_length_382_cov_1.537538_g116244_i0 PRJNA643700 117799 382 1.537538 5.87339516 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 43.1 0.0234   NR MBW2970944.1 2026803 g116244 i0 37 0.424083769633508 54 34 42.4 0 177 338 35 88 MBW2970944.1 hypothetical protein [Candidatus Woesearchaeota archaeon] diamond 162 43.1 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32830926 32830926 PRJNA643700_P_NODE_268000_length_228_cov_1.178771_g266444_i0 PRJNA643700 268000 228 1.178771 2.68759788 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 44.3 0.00896   NR MFA5382703.1 3018267 g266444 i0 29 0.815789473684211 62 44 81.6 0 9 194 597 658 MFA5382703.1 RHS repeat-associated core domain-containing protein [Candidatus Micrarchaeia archaeon] diamond 186 44.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;