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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA643700" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 12 ✖

bioproject 1

  • PRJNA643700 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27049757 27049757 PRJNA643700_P_NODE_184602_length_293_cov_1.758197_g183046_i0 PRJNA643700 184602 293 1.758197 5.15151721 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.0138   NR MBL7071077.1 2035772 g183046 i0 42.3 0.532423208191126 52 28 51.2 1 112 261 131 182 MBL7071077.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 156 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27302659 27302659 PRJNA643700_P_NODE_305003_length_207_cov_1.601266_g303447_i0 PRJNA643700 305003 207 1.601266 3.31462062 Sedimentisphaerales bacterium 2813034 Bacteria Bacteria 43.5 0.0123   NR MBN2139066.1 2813034 g303447 i0 43.5 0.666666666666667 46 26 66.7 0 47 184 421 466 MBN2139066.1 gamma-glutamylcyclotransferase [Sedimentisphaerales bacterium] diamond 138 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Sedimentisphaerales     Sedimentisphaerales bacterium
27586873 27586873 PRJNA643700_P_NODE_288744_length_216_cov_1.209581_g287188_i0 PRJNA643700 288744 216 1.209581 2.61269496 Pirellulales bacterium 2715253 Bacteria Bacteria 43.9 0.0105   NR HZZ29994.1 2715253 g287188 i0 37.7 0.736111111111111 53 30 69.4 1 7 156 39 91 HZZ29994.1 TolC family protein [Pirellulales bacterium] diamond 159 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
27870840 27870840 PRJNA643700_P_NODE_221385_length_260_cov_2.298578_g219829_i0 PRJNA643700 221385 260 2.298578 5.9763028 Victivallaceae bacterium 2793042 Bacteria Bacteria 45.4 0.00518   NR MDD4180908.1 2793042 g219829 i0 42.5 0.461538461538462 40 22 45 1 201 85 32 71 MDD4180908.1 beta-galactosidase trimerization domain-containing protein [Victivallaceae bacterium] diamond 120 45.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae   Victivallaceae bacterium
27902324 27902324 PRJNA643700_P_NODE_412345_length_164_cov_1.356522_g410789_i0 PRJNA643700 412345 164 1.356522 2.22469608 Verrucomicrobia bacterium Tous-C9LFEB 1982333 Bacteria Bacteria 41.6 0.0334   NR PAW77838.1 1982333 g410789 i0 39 0.75 41 25 75 0 142 20 467 507 PAW77838.1 MAG: hypothetical protein B9S32_09555 [Verrucomicrobia bacterium Tous-C9LFEB] diamond 123 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium Tous-C9LFEB
28313071 28313071 PRJNA643700_P_NODE_236886_length_248_cov_15.321608_g235330_i0 PRJNA643700 236886 248 15.321608 37.99758784 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.5 0.0216   NR MEK0445437.1 2026799 g235330 i0 38 0.604838709677419 50 31 60.5 0 76 225 398 447 MEK0445437.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 150 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28628934 28628934 PRJNA643700_P_NODE_196427_length_282_cov_1.115880_g194871_i0 PRJNA643700 196427 282 1.11588 3.1467816 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.9 0.0198   NR MBR1965056.1 2053569 g194871 i0 32.3 0.659574468085106 62 42 66 0 51 236 15 76 MBR1965056.1 hypothetical protein [Lentisphaeria bacterium] diamond 186 43.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28692070 28692070 PRJNA643700_P_NODE_230787_length_253_cov_1.754902_g229231_i0 PRJNA643700 230787 253 1.754902 4.43990206 Chlamydiales bacterium 2047757 Bacteria Bacteria 43.1 0.0297   NR MDR2540118.1 2047757 g229231 i0 40.7 0.640316205533597 54 29 60.5 2 98 250 64 117 MDR2540118.1 NAD(P)-dependent oxidoreductase [Chlamydiales bacterium] diamond 162 43.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29165701 29165701 PRJNA643700_P_NODE_135009_length_354_cov_1.032787_g133454_i0 PRJNA643700 135009 354 1.032787 3.65606598 Phycisphaerales bacterium 2052180 Bacteria Bacteria 44.3 0.033   NR MCA9280103.1 2052180 g133454 i0 36.7 0.508474576271186 60 33 50.8 1 314 135 116 170 MCA9280103.1 UDP-glucose 4-epimerase GalE [Phycisphaerales bacterium] diamond 180 44.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29733555 29733555 PRJNA643700_P_NODE_180970_length_297_cov_1.258065_g179414_i0 PRJNA643700 180970 297 1.258065 3.73645305 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.7 0.0409   NR RMF76061.1 2026780 g179414 i0 37.7 0.535353535353535 53 22 53.5 1 29 187 12 53 RMF76061.1 MAG: hypothetical protein D6744_12685 [Planctomycetota bacterium] diamond 159 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30934450 30934450 PRJNA643700_P_NODE_359214_length_181_cov_1.545455_g357658_i0 PRJNA643700 359214 181 1.545455 2.79727355 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42 0.0304   NR MFM1748863.1 2026799 g357658 i0 38.8 0.812154696132597 49 25 81.2 1 150 4 16 59 MFM1748863.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 147 42 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31471933 31471933 PRJNA643700_P_NODE_274736_length_224_cov_1.188571_g273180_i0 PRJNA643700 274736 224 1.188571 2.66239904 Planctomycetota bacterium 2026780 Bacteria Bacteria 42.7 0.0289   NR MBN1807603.1 2026780 g273180 i0 41.5 0.549107142857143 41 24 54.9 0 139 17 181 221 MBN1807603.1 MFS transporter [Planctomycetota bacterium] diamond 123 42.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;