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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA642647" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27713476 27713476 PRJNA642647_P_NODE_5644_length_160_cov_1.886179_g5594_i0 PRJNA642647 5644 160 1.886179 3.0178864 Opitutaceae bacterium 2006848 Bacteria Bacteria 89.4 2.33e-20   NR MBW7896562.1 2006848 g5594 i0 78.8 0.975 52 11 97.5 0 3 158 81 132 MBW7896562.1 hypothetical protein [Opitutaceae bacterium] diamond 156 89.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
28028934 28028934 PRJNA642647_P_NODE_6265_length_153_cov_0.905172_g6215_i0 PRJNA642647 6265 153 0.905172 1.38491316 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 74.3 7.15e-14   NR HOX60287.1 2026799 g6215 i0 71.4 0.96078431372549 49 14 96.1 0 151 5 200 248 HOX60287.1 helicase-related protein [Verrucomicrobiota bacterium] diamond 147 74.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28565552 28565552 PRJNA642647_P_NODE_2467_length_220_cov_1.519126_g2417_i0 PRJNA642647 2467 220 1.519126 3.3420772 Luteolibacter sp. 1962973 Bacteria Bacteria 114 8.729999999999999e-28   NR MFT3991681.1 1962973 g2417 i0 72.2 0.981818181818182 72 20 98.2 0 216 1 105 176 MFT3991681.1 hypothetical protein [Luteolibacter sp.] diamond 216 114 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
28723490 28723490 PRJNA642647_P_NODE_6727_length_150_cov_1.318584_g6677_i0 PRJNA642647 6727 150 1.318584 1.977876 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 86.3 2.57e-18   NR MBL9172927.1 2026801 g6677 i0 81.6 0.98 49 9 98 0 148 2 134 182 MBL9172927.1 immunoglobulin domain-containing protein [Verrucomicrobiales bacterium] diamond 147 86.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28912623 28912623 PRJNA642647_P_NODE_4028_length_180_cov_0.804196_g3978_i0 PRJNA642647 4028 180 0.804196 1.4475528 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 55.1 7.03e-7   NR MFN0130813.1 2026801 g3978 i0 44.1 0.983333333333333 59 31 98.3 1 179 3 654 710 MFN0130813.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 177 55.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28912627 28912627 PRJNA642647_P_NODE_5048_length_166_cov_2.922481_g4998_i0 PRJNA642647 5048 166 2.922481 4.85131846 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 42.7 0.0134   NR MCF7674599.1 2562705 g4998 i0 82.6 1.24698795180723 23 4 41.6 0 165 97 88 110 MCF7674599.1 hypothetical protein [Akkermansiaceae bacterium] diamond 207 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
29134079 29134079 PRJNA642647_P_NODE_4469_length_172_cov_0.948148_g4419_i0 PRJNA642647 4469 172 0.948148 1.63081456 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 101 1.96e-24   NR MDQ5980720.1 2026799 g4419 i0 96.3 0.941860465116279 54 2 94.2 0 6 167 84 137 MDQ5980720.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 162 101 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29638741 29638741 PRJNA642647_P_NODE_4910_length_166_cov_3.348837_g4860_i0 PRJNA642647 4910 166 3.348837 5.55906942 Opitutus sp. 1913982 Bacteria Bacteria 51.2 1.36e-5   NR MSU50147.1 1913982 g4860 i0 35.3 1.8433734939759 102 18 97.6 2 4 165 588 689 MSU50147.1 hypothetical protein [Opitutus sp.] diamond 306 51.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
29701866 29701866 PRJNA642647_P_NODE_4710_length_168_cov_2.328244_g4660_i0 PRJNA642647 4710 168 2.328244 3.91144992 Haloferula sp. 2497595 Bacteria Bacteria 106 4.3e-26   NR HEY1122245.1 2497595 g4660 i0 83.3 1.92857142857143 54 9 96.4 0 164 3 119 172 HEY1122245.1 hypothetical protein [Haloferula sp.] diamond 324 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Haloferula Haloferula sp.
29796842 29796842 PRJNA642647_P_NODE_6491_length_151_cov_3.096491_g6441_i0 PRJNA642647 6491 151 3.096491 4.67570141 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 51.2 1.09e-5   NR MBK7997852.1 2026799 g6441 i0 59.5 2.32450331125828 37 8 59.6 1 150 61 545 581 MBK7997852.1 transglutaminase domain-containing protein [Verrucomicrobiota bacterium] diamond 351 51.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30175935 30175935 PRJNA642647_P_NODE_5192_length_166_cov_2.573643_g5142_i0 PRJNA642647 5192 166 2.573643 4.27224738 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 68.9 9.22e-13   NR HXI72320.1 2499141 g5142 i0 50.8 2.15060240963855 59 23 95.8 1 4 162 93 151 HXI72320.1 pentapeptide repeat-containing protein [Verrucomicrobiia bacterium] diamond 357 68.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30883386 30883386 PRJNA642647_P_NODE_6394_length_151_cov_3.921053_g6344_i0 PRJNA642647 6394 151 3.921053 5.92079003 Pseudomonadati 3379134 Bacteria Bacteria 45.1 0.00163   NR RPJ30090.1 2026800 g6344 i0 72.4 3.63576158940397 29 7 55.6 1 1 84 138 166 RPJ30090.1 MAG: AAA family ATPase [Verrucomicrobiaceae bacterium] diamond 549 45.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30902803 30902803 PRJNA642647_P_NODE_5594_length_161_cov_1.217742_g5544_i0 PRJNA642647 5594 161 1.217742 1.96056462 Verrucomicrobia bacterium ADurb.Bin122 1852929 Bacteria Bacteria 84 3.21e-17   NR OQB94327.1 1852929 g5544 i0 77.6 0.91304347826087 49 11 91.3 0 158 12 167 215 OQB94327.1 MAG: Replicative DNA helicase [Verrucomicrobia bacterium ADurb.Bin122] diamond 147 84 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium ADurb.Bin122
30966115 30966115 PRJNA642647_P_NODE_2774_length_209_cov_0.877907_g2724_i0 PRJNA642647 2774 209 0.877907 1.83482563 Candidatus Synoicihabitans sp. 3069606 Bacteria Bacteria 45.8 0.0019   NR HEX2101322.1 3069606 g2724 i0 44.1 0.84688995215311 59 33 84.7 0 198 22 171 229 HEX2101322.1 hypothetical protein [Candidatus Synoicihabitans sp.] diamond 177 45.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Synoicihabitans Candidatus Synoicihabitans sp.
31060982 31060982 PRJNA642647_P_NODE_2815_length_207_cov_2.441176_g2765_i0 PRJNA642647 2815 207 2.441176 5.05323432 Luteolibacter pohnpeiensis 454153 Bacteria Bacteria 115 2.55e-28   NR WP_200274118.1 454153 g2765 i0 74.2 0.956521739130435 66 17 95.7 0 203 6 409 474 WP_200274118.1 ParB N-terminal domain-containing protein [Luteolibacter pohnpeiensis] diamond 198 115 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter pohnpeiensis
31408569 31408569 PRJNA642647_P_NODE_4016_length_180_cov_1.349650_g3966_i0 PRJNA642647 4016 180 1.34965 2.42937 Opitutaceae bacterium 2006848 Bacteria Bacteria 92.8 5.78e-22   NR MBC7365236.1 2006848 g3966 i0 76.3 0.983333333333333 59 14 98.3 0 2 178 101 159 MBC7365236.1 hypothetical protein [Opitutaceae bacterium] diamond 177 92.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31420764 31420764 PRJNA642647_P_NODE_4876_length_166_cov_3.813953_g4826_i0 PRJNA642647 4876 166 3.813953 6.33116198 Bacteria 2 Bacteria Bacteria 55.8 2.84e-7   NR MBS0657466.1 2026799 g4826 i0 58.1 5.78313253012048 43 18 77.7 0 129 1 140 182 MBS0657466.1 sterol desaturase family protein [Verrucomicrobiota bacterium] diamond 960 56.2 0.99288256227758 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31819575 31819575 PRJNA642647_P_NODE_5337_length_165_cov_0.890625_g5287_i0 PRJNA642647 5337 165 0.890625 1.46953125 Haloferula sp. 2497595 Bacteria Bacteria 49.7 1.24e-5   NR HEY1121745.1 2497595 g5287 i0 76.7 0.545454545454545 30 7 54.5 0 74 163 1 30 HEY1121745.1 hypothetical protein [Haloferula sp.] diamond 90 49.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Haloferula Haloferula sp.
32009544 32009544 PRJNA642647_P_NODE_658_length_441_cov_3.455446_g609_i0 PRJNA642647 658 441 3.455446 15.23851686 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 73.2 7.17e-12   NR HYG84585.1 2499141 g609 i0 39.7 0.789115646258503 116 67 78.2 2 437 93 295 408 HYG84585.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 348 73.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32104392 32104392 PRJNA642647_P_NODE_2238_length_229_cov_6.359375_g2188_i0 PRJNA642647 2238 229 6.359375 14.56296875 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 44.3 0.00862   NR HYG84585.1 2499141 g2188 i0 31.7 1.83406113537118 82 41 89.1 2 206 3 199 279 HYG84585.1 hypothetical protein [Verrucomicrobiia bacterium] diamond 420 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32136165 32136165 PRJNA642647_P_NODE_4898_length_166_cov_3.457364_g4848_i0 PRJNA642647 4898 166 3.457364 5.73922424 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 54.7 7.97e-7   NR MEY3895831.1 2026799 g4848 i0 33.7 1.71686746987952 95 19 92.2 1 156 4 88 182 MEY3895831.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 285 54.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32231213 32231213 PRJNA642647_P_NODE_2938_length_204_cov_2.449102_g2888_i0 PRJNA642647 2938 204 2.449102 4.99616808 Opitutia bacterium 2026771 Bacteria Bacteria 51.2 2.31e-5   NR MEL0098007.1 2026771 g2888 i0 57.9 0.558823529411765 38 10 55.9 1 91 204 191 222 MEL0098007.1 hypothetical protein [Opitutia bacterium] diamond 114 51.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
32893699 32893699 PRJNA642647_P_NODE_5580_length_161_cov_1.580645_g5530_i0 PRJNA642647 5580 161 1.580645 2.54483845 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 113 1.59e-27   NR MEY3894838.1 2026799 g5530 i0 96 0.93167701863354 50 2 93.2 0 157 8 183 232 MEY3894838.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 150 113 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;