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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA642647" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJNA642647 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26796469 26796469 PRJNA642647_P_NODE_5921_length_157_cov_0.916667_g5871_i0 PRJNA642647 5921 157 0.916667 1.43916719 Corallococcus exiguus 83462 Bacteria Bacteria 42.7 0.0112   NR WP_206884372.1 83462 g5871 i0 51.5 1.31847133757962 33 16 63.1 0 149 51 227 259 WP_206884372.1 HNH endonuclease [Corallococcus exiguus] diamond 207 42.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus exiguus
27460620 27460620 PRJNA642647_P_NODE_2483_length_219_cov_2.510989_g2433_i0 PRJNA642647 2483 219 2.510989 5.49906591 Polyangiaceae bacterium 2268199 Bacteria Bacteria 40 0.0499   NR HQP34498.1 2268199 g2433 i0 66.7 0.328767123287671 24 8 32.9 0 128 57 46 69 HQP34498.1 hypothetical protein [Polyangiaceae bacterium] diamond 72 40 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27492121 27492121 PRJNA642647_P_NODE_1323_length_304_cov_2.063670_g1273_i0 PRJNA642647 1323 304 2.06367 6.2735568 Polyangiaceae bacterium 2268199 Bacteria Bacteria 69.3 2.1e-12   NR MBK9260809.1 2268199 g1273 i0 38.8 1.14473684210526 116 29 73 2 5 226 26 141 MBK9260809.1 hypothetical protein [Polyangiaceae bacterium] diamond 348 69.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
27902315 27902315 PRJNA642647_P_NODE_2885_length_205_cov_4.672619_g2835_i0 PRJNA642647 2885 205 4.672619 9.57886895 Polyangiaceae bacterium 2268199 Bacteria Bacteria 63.2 8.68e-10   NR MBK9263032.1 2268199 g2835 i0 61 0.6 41 13 55.6 1 200 87 229 269 MBK9263032.1 PD-(D/E)XK nuclease-like domain-containing protein [Polyangiaceae bacterium] diamond 123 63.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28028933 28028933 PRJNA642647_P_NODE_5685_length_160_cov_1.186992_g5635_i0 PRJNA642647 5685 160 1.186992 1.8991872 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 41.2 0.0149   NR HHD11908.1 2026735 g5635 i0 40.5 0.69375 37 22 69.4 0 4 114 71 107 HHD11908.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 111 41.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28091909 28091909 PRJNA642647_P_NODE_4185_length_176_cov_3.597122_g4135_i0 PRJNA642647 4185 176 3.597122 6.33093472 Polyangiaceae bacterium 2268199 Bacteria Bacteria 56.2 7.47e-8   NR MCU0689773.1 2268199 g4135 i0 82.1 0.477272727272727 28 5 47.7 0 6 89 24 51 MCU0689773.1 HNH endonuclease [Polyangiaceae bacterium] diamond 84 56.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28407770 28407770 PRJNA642647_P_NODE_866_length_380_cov_1.930029_g816_i0 PRJNA642647 866 380 1.930029 7.3341102 Polyangiaceae bacterium 2268199 Bacteria Bacteria 124 1.89e-30   NR MCL2724853.1 2268199 g816 i0 70.5 0.694736842105263 88 26 69.5 0 265 2 336 423 MCL2724853.1 hypothetical protein [Polyangiaceae bacterium] diamond 264 124 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28660401 28660401 PRJNA642647_P_NODE_2547_length_216_cov_3.921788_g2497_i0 PRJNA642647 2547 216 3.921788 8.47106208 Labilithrix luteola 1391654 Bacteria Bacteria 48.5 1.43e-4   NR AKU93339.1 1391654 g2497 i0 56.9 0.708333333333333 51 16 69.4 2 57 206 116 161 AKU93339.1 hypothetical protein AKJ09_00003 [Labilithrix luteola] diamond 153 48.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
28692067 28692067 PRJNA642647_P_NODE_5887_length_157_cov_1.800000_g5837_i0 PRJNA642647 5887 157 1.8 2.826 Myxococcales bacterium 2026763 Bacteria Bacteria 87.4 4.67e-20   NR MBL0197634.1 2026763 g5837 i0 95.3 0.821656050955414 43 2 82.2 0 28 156 1 43 MBL0197634.1 hypothetical protein [Myxococcales bacterium] diamond 129 87.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28912621 28912621 PRJNA642647_P_NODE_3228_length_196_cov_1.509434_g3178_i0 PRJNA642647 3228 196 1.509434 2.95849064 Polyangium sp. 3409587 Bacteria Bacteria 67 8.49e-12   NR HMY20343.1 57 g3178 i0 84.6 0.596938775510204 39 6 59.7 0 195 79 138 176 HMY20343.1 hypothetical protein [Polyangium sp.] diamond 117 67 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium sp.
29134078 29134078 PRJNA642647_P_NODE_3829_length_183_cov_1.760274_g3779_i0 PRJNA642647 3829 183 1.760274 3.22130142 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 56.6 2.2e-8   NR MDP3937728.1 2026735 g3779 i0 48.3 0.950819672131147 58 28 91.8 1 183 16 55 112 MDP3937728.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 174 56.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29260002 29260002 PRJNA642647_P_NODE_3969_length_180_cov_3.671329_g3919_i0 PRJNA642647 3969 180 3.671329 6.6083922 Labilithrix sp. 1971228 Bacteria Bacteria 77.4 7.73e-15   NR MBX3218891.1 1971228 g3919 i0 66.1 2.98333333333333 59 20 98.3 0 2 178 92 150 MBX3218891.1 hypothetical protein [Labilithrix sp.] diamond 537 77.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30555003 30555003 PRJNA642647_P_NODE_5073_length_166_cov_2.891473_g5023_i0 PRJNA642647 5073 166 2.891473 4.79984518 Myxococcales bacterium 2026763 Bacteria Bacteria 45.4 5.73e-4   NR MBL0197454.1 2026763 g5023 i0 76 0.451807228915663 25 6 45.2 0 165 91 68 92 MBL0197454.1 DUF2190 family protein [Myxococcales bacterium] diamond 75 45.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31123555 31123555 PRJNA642647_P_NODE_4055_length_179_cov_1.563380_g4005_i0 PRJNA642647 4055 179 1.56338 2.7984502 Polyangiaceae bacterium 2268199 Bacteria Bacteria 42 0.0299   NR MEZ4219428.1 2268199 g4005 i0 40.8 0.82122905027933 49 29 82.1 0 27 173 270 318 MEZ4219428.1 CxxxxCH/CxxCH domain-containing protein [Polyangiaceae bacterium] diamond 147 42 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31926843 31926843 PRJNA642647_P_NODE_4277_length_175_cov_1.463768_g4227_i0 PRJNA642647 4277 175 1.463768 2.561594 Myxococcia 32015 Bacteria Bacteria 58.9 1.07e-8   NR MFO0712413.1 2024858 g4227 i0 57.1 17.7257142857143 56 24 96 0 171 4 136 191 MFO0712413.1 sigma factor-like helix-turn-helix DNA-binding protein [Sandaracinus sp.] diamond 3102 59.3 0.993254637436762 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus sp.
32104393 32104393 PRJNA642647_P_NODE_2558_length_216_cov_2.849162_g2508_i0 PRJNA642647 2558 216 2.849162 6.15418992 Polyangiaceae bacterium 2268199 Bacteria Bacteria 57 2.34e-7   NR MCL2777727.1 2268199 g2508 i0 60.5 0.527777777777778 38 15 52.8 0 118 5 23 60 MCL2777727.1 phage protease [Polyangiaceae bacterium] diamond 114 57 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32673265 32673265 PRJNA642647_P_NODE_5360_length_164_cov_2.055118_g5310_i0 PRJNA642647 5360 164 2.0551179999999998 3.37039352 Pyxidicoccus xibeiensis 2906759 Bacteria Bacteria 41.6 0.0327   NR WP_253982249.1 2906759 g5310 i0 32 0.914634146341463 50 34 91.5 0 158 9 175 224 WP_253982249.1 hypothetical protein [Pyxidicoccus xibeiensis] diamond 150 41.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Pyxidicoccus Pyxidicoccus xibeiensis
32767815 32767815 PRJNA642647_P_NODE_1320_length_304_cov_2.883895_g1270_i0 PRJNA642647 1320 304 2.883895 8.7670408 Polyangiaceae bacterium 2268199 Bacteria Bacteria 65.5 6.21e-11   NR MBK9260806.1 2268199 g1270 i0 66.7 0.384868421052632 39 13 38.5 0 290 174 1 39 MBK9260806.1 hypothetical protein [Polyangiaceae bacterium] diamond 117 65.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;