RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA642647" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28028932 28028932 PRJNA642647_P_NODE_4465_length_172_cov_1.103704_g4415_i0 PRJNA642647 4465 172 1.103704 1.89837088 Podila horticola 311239 Fungi Fungi 77.8 1.41e-15   NR KAF9306318.1 311239 g4415 i0 58.9 1.93604651162791 56 23 97.7 0 4 171 188 243 KAF9306318.1 hypothetical protein BG003_001055, partial [Podila horticola] diamond 333 77.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila horticola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;