RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA642647" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA642647 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28786392 28786392 PRJNA642647_P_NODE_1067_length_342_cov_3.475410_g1017_i0 PRJNA642647 1067 342 3.47541 11.8859022 Phoenicopterus roseus parvo-like hybrid virus 2794530 Viruses Viruses 153 2.2199999999999998e-42   NR QTE03706.1 2794530 g1017 i0 86.4 4.28947368421053 81 11 71.1 0 337 95 220 300 QTE03706.1 MAG: replication protein [Phoenicopterus roseus parvo-like hybrid virus] diamond 1467 153 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopterus roseus parvo-like hybrid virus
29102460 29102460 PRJNA642647_P_NODE_748_length_407_cov_2.864865_g698_i0 PRJNA642647 748 407 2.864865 11.66000055 Parvoviridae sp. 1940570 Viruses Viruses 95.1 7.36e-20   NR XNT20749.1 1940570 g698 i0 40.5 1.09090909090909 148 74 99.5 6 1 405 24 170 XNT20749.1 MAG: replication protein [Parvoviridae sp.] diamond 444 95.1 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
29228867 29228867 PRJNA642647_P_NODE_3269_length_195_cov_1.120253_g3219_i0 PRJNA642647 3269 195 1.120253 2.18449335 Densovirinae sp. 2030127 Viruses Viruses 63.2 1.21e-9   NR QJI53739.1 2030127 g3219 i0 46.8 0.953846153846154 62 31 95.4 1 5 190 92 151 QJI53739.1 MAG: nonstructural protein NS1 [Densovirinae sp.] diamond 186 63.2 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum5
29607123 29607123 PRJNA642647_P_NODE_4890_length_166_cov_3.503876_g4840_i0 PRJNA642647 4890 166 3.503876 5.81643416 Duck parvovirus 341673 Viruses Viruses 75.9 4.41e-15   NR UAJ21408.1 341673 g4840 i0 47.3 1.64457831325301 91 10 95.8 1 3 161 128 218 UAJ21408.1 nonstructural protein 1, partial [Duck parvovirus] diamond 273 75.9 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Dependoparvovirus Dependoparvovirus anseriform1
32516015 32516015 PRJNA642647_P_NODE_4759_length_167_cov_8.284615_g4709_i0 PRJNA642647 4759 167 8.284615 13.83530705 Phoenicopterus roseus parvo-like hybrid virus 2794530 Viruses Viruses 53.9 1.49e-6   NR QTE03705.1 2794530 g4709 i0 42.6 0.970059880239521 54 31 97 0 6 167 268 321 QTE03705.1 MAG: capsid protein, partial [Phoenicopterus roseus parvo-like hybrid virus] diamond 162 53.9 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopterus roseus parvo-like hybrid virus
32547648 32547648 PRJNA642647_P_NODE_6259_length_153_cov_0.982759_g6209_i0 PRJNA642647 6259 153 0.982759 1.50362127 Phoenicopterus roseus parvo-like hybrid virus 2794530 Viruses Viruses 42.4 0.0147   NR QTE03705.1 2794530 g6209 i0 46.7 0.882352941176471 45 24 88.2 0 149 15 162 206 QTE03705.1 MAG: capsid protein, partial [Phoenicopterus roseus parvo-like hybrid virus] diamond 135 42.4 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Phoenicopterus roseus parvo-like hybrid virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;