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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA642647" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28483184 28483184 PRJNA642647_P_NODE_6306_length_152_cov_2.591304_g6256_i0 PRJNA642647 6306 152 2.591304 3.93878208 root 1 Root_unresolved Root_unresolved 48.9 7.12e-5   NR QKY88654.1 271932 g6256 i0 46 8.23026315789474 50 23 90.8 1 7 144 231 280 QKY88654.1 matrix metalloprotease 13 [Tetracapsuloides bryosalmonae] diamond 1251 49.3 0.991886409736308 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Malacovalvulida Saccosporidae Tetracapsuloides Tetracapsuloides bryosalmonae
31060984 31060984 PRJNA642647_P_NODE_4255_length_175_cov_2.210145_g4205_i0 PRJNA642647 4255 175 2.210145 3.86775375 Actinostola sp. cb2 3060491 Cnidaria other_Eukaryota 47.4 3.37e-4   NR KAK3748527.1 3060491 g4205 i0 56.3 0.548571428571429 32 14 54.9 0 3 98 474 505 KAK3748527.1 hypothetical protein QZH41_012374 [Actinostola sp. cb2023] diamond 96 47.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actinostolidae Actinostola Actinostola sp. cb2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;