RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA642647" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA642647 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31389315 31389315 PRJNA642647_P_NODE_5056_length_166_cov_2.914729_g5006_i0 PRJNA642647 5056 166 2.914729 4.83845014 Agaricales 5338 Fungi Fungi 49.7 4.56e-5   NR KAJ7601139.1 1033242 g5006 i0 84 1.35542168674699 25 4 45.2 0 164 90 495 519 KAJ7601139.1 thiamine diphosphate-binding protein [Mycena floridula] diamond 225 50.1 0.992015968063872 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena floridula
32736580 32736580 PRJNA642647_P_NODE_2520_length_218_cov_1.259669_g2470_i0 PRJNA642647 2520 218 1.259669 2.74607842 Phenoliferia sp. Uapishka_3 3038894 Fungi Fungi 42.4 0.0364   NR KAK4701127.1 3038894 g2470 i0 52.2 0.63302752293578 46 17 63.3 1 197 60 234 274 KAK4701127.1 hypothetical protein P7C70_g5108, partial [Phenoliferia sp. Uapishka_3] diamond 138 42.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Kriegeriales Kriegeriaceae Phenoliferia Phenoliferia sp. Uapishka_3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;