contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA642647" and tax_kingdom = "Metazoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27776394 | 27776394 | PRJNA642647_P_NODE_1424_length_292_cov_2.890196_g1374_i0 | PRJNA642647 | 1424 | 292 | 2.890196 | 8.43937232 | Brugia pahangi | 6280 | Nematoda | Nematoda | 46.6 | 0.0028 | NR | VDN81525.1 | 6280 | g1374 | i0 | 48.3 | 2.20890410958904 | 60 | 25 | 60.6 | 2 | 285 | 109 | 278 | 332 | VDN81525.1 unnamed protein product [Brugia pahangi] | diamond | 645 | 46.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Onchocercidae | Brugia | Brugia pahangi | |
| 28483184 | 28483184 | PRJNA642647_P_NODE_6306_length_152_cov_2.591304_g6256_i0 | PRJNA642647 | 6306 | 152 | 2.591304 | 3.93878208 | root | 1 | Root_unresolved | Root_unresolved | 48.9 | 7.12e-5 | NR | QKY88654.1 | 271932 | g6256 | i0 | 46 | 8.23026315789474 | 50 | 23 | 90.8 | 1 | 7 | 144 | 231 | 280 | QKY88654.1 matrix metalloprotease 13 [Tetracapsuloides bryosalmonae] | diamond | 1251 | 49.3 | 0.991886409736308 | Eukaryota | Opisthokonta | Metazoa | Cnidaria | Myxozoa | Malacovalvulida | Saccosporidae | Tetracapsuloides | Tetracapsuloides bryosalmonae | |
| 29146566 | 29146566 | PRJNA642647_P_NODE_6429_length_151_cov_3.350877_g6379_i0 | PRJNA642647 | 6429 | 151 | 3.350877 | 5.05982427 | Rodentia | 9989 | Chordata | Chordata | 53.9 | 1.21e-6 | NR | EGW07491.1 | 10029 | g6379 | i0 | 85.7 | 7.47019867549669 | 28 | 4 | 55.6 | 0 | 5 | 88 | 406 | 433 | EGW07491.1 Inositol 1,4,5-trisphosphate receptor type 2 [Cricetulus griseus] | diamond | 1128 | 53.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Cricetidae | Cricetulus | Cricetulus griseus | |
| 31060984 | 31060984 | PRJNA642647_P_NODE_4255_length_175_cov_2.210145_g4205_i0 | PRJNA642647 | 4255 | 175 | 2.210145 | 3.86775375 | Actinostola sp. cb2 | 3060491 | Cnidaria | other_Eukaryota | 47.4 | 3.37e-4 | NR | KAK3748527.1 | 3060491 | g4205 | i0 | 56.3 | 0.548571428571429 | 32 | 14 | 54.9 | 0 | 3 | 98 | 474 | 505 | KAK3748527.1 hypothetical protein QZH41_012374 [Actinostola sp. cb2023] | diamond | 96 | 47.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Cnidaria | Anthozoa | Actiniaria | Actinostolidae | Actinostola | Actinostola sp. cb2023 | |
| 31389314 | 31389314 | PRJNA642647_P_NODE_1236_length_315_cov_2.996403_g1186_i0 | PRJNA642647 | 1236 | 315 | 2.996403 | 9.43866945 | Metazoa | 33208 | Arthropoda | Arthropoda | 45.8 | 0.00668 | NR | XP_050359582.1 | 171585 | g1186 | i0 | 28.6 | 4.22857142857143 | 91 | 40 | 71.4 | 4 | 296 | 72 | 214 | 295 | XP_050359582.1 myoneurin-like isoform X2 [Nymphalis io] | diamond | 1332 | 46.2 | 0.991341991341991 | Eukaryota | Opisthokonta | Metazoa | Arthropoda | Insecta | Lepidoptera | Nymphalidae | Nymphalis | Nymphalis io |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;