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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA641991" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 34 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641991 · 34 ✖

analysis 1

  • diamond · 34 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
617770 617770 PRJNA641991_S_NODE_301_length_892_cov_2.888493_g234_i0 PRJNA641991 301 892 2.888493 25.765357560000002 Lotus japonicus 34305 Plants Plants 284 8.95e-94   NR AFK39667.1 34305 g234 i0 95.7 0.548206278026906 163 6 54.8 1 26 514 1 162 AFK39667.1 unknown [Lotus japonicus] diamond 489 284 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
6262090 6262090 PRJNA641991_S_NODE_6605_length_214_cov_1.333333_g6486_i0 PRJNA641991 6605 214 1.333333 2.85333262 Hordeum vulgare subsp. vulgare 112509 Plants Plants 119 3.859999999999999e-31   NR BAK00797.1 112509 g6486 i0 73.9 0.967289719626168 69 18 96.7 0 5 211 200 268 BAK00797.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 207 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
14646682 14646682 PRJNA641991_S_NODE_10552_length_176_cov_1.078740_g10433_i0 PRJNA641991 10552 176 1.07874 1.8985824 Eukaryota 2759 Plants Plants 116 4.85e-29   NR BAK02869.1 112509 g10433 i0 84.5 4.94318181818182 58 9 98.9 0 1 174 304 361 BAK02869.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 870 117 0.991452991452991 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
21020180 21020180 PRJNA641991_S_NODE_3737_length_274_cov_1.008889_g3618_i0 PRJNA641991 3737 274 1.008889 2.76435586 Lotus japonicus 34305 Plants Plants 168 6.03e-48   NR AFK39210.1 34305 g3618 i0 96.7 4.92700729927007 90 3 98.5 0 3 272 222 311 AFK39210.1 unknown [Lotus japonicus] diamond 1350 168 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
22835841 22835841 PRJNA641991_S_NODE_1358_length_452_cov_2.233251_g1239_i0 PRJNA641991 1358 452 2.233251 10.09429452 root 1 Root_unresolved Root_unresolved 288 7.94e-93   NR CAI9777376.1 56036 g1239 i0 94 200.090707964602 150 9 99.6 0 452 3 175 324 CAI9777376.1 unnamed protein product [Fraxinus pennsylvanica] diamond 90441 290 0.993103448275862 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
24844087 24844087 PRJNA641991_P_NODE_920_length_349_cov_1.413333_g879_i0 PRJNA641991 920 349 1.413333 4.93253217 Hordeum vulgare subsp. vulgare 112509 Plants Plants 196 7.76e-60   NR BAK02675.1 112509 g879 i0 90.2 4.36676217765043 102 10 87.7 0 349 44 232 333 BAK02675.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 1524 196 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
26872400 26872400 PRJNA641991_P_NODE_4241_length_161_cov_0.910714_g4200_i0 PRJNA641991 4241 161 0.910714 1.46624954 Eukaryota 2759 Plants Plants 85.1 1.42e-17   NR XP_028945240.1 3750 g4200 i0 75.5 3.91304347826087 53 13 98.8 0 160 2 600 652 XP_028945240.1 imidazole glycerol phosphate synthase hisHF, chloroplastic-like [Malus domestica] diamond 630 85.9 0.990686845168801 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus domestica
26935301 26935301 PRJNA641991_S_NODE_11242_length_171_cov_1.598361_g11123_i0 PRJNA641991 11242 171 1.598361 2.73319731 Eukaryota 2759 Plants Plants 40.8 0.0322   NR KAI9200295.1 4023 g11123 i0 51.4 11.1929824561404 37 18 64.9 0 120 10 66 102 KAI9200295.1 hypothetical protein LWI28_005598 [Acer negundo] diamond 1914 41.2 0.990291262135922 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Sapindaceae Acer Acer negundo
27081224 27081224 PRJNA641991_S_NODE_14362_length_162_cov_0.902655_g14243_i0 PRJNA641991 14362 162 0.902655 1.4623011 Juncus effusus 13579 Plants Plants 46.6 5.39e-4   NR KAJ3673847.1 13579 g14243 i0 55 2.68518518518519 40 18 74.1 0 2 121 1884 1923 KAJ3673847.1 hypothetical protein LUZ60_005839 [Juncus effusus] diamond 435 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus
27188204 27188204 PRJNA641991_P_NODE_3102_length_171_cov_0.885246_g3061_i0 PRJNA641991 3102 171 0.885246 1.51377066 Eukaryota 2759 Plants Plants 102 1e-23   NR BAJ93696.1 112509 g3061 i0 96.5 2 57 2 100 0 171 1 547 603 BAJ93696.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 342 103 0.990291262135922 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
27270861 27270861 PRJNA641991_S_NODE_14823_length_161_cov_0.910714_g14704_i0 PRJNA641991 14823 161 0.910714 1.46624954 Marchantia polymorpha 3197 Plants Plants 43.1 0.00908   NR PTQ26179.1 3197 g14704 i0 53.6 2.08695652173913 28 13 52.2 0 6 89 149 176 PTQ26179.1 hypothetical protein MARPO_YA0043 [Marchantia polymorpha] diamond 336 43.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Marchantiaceae Marchantia Marchantia polymorpha
27630799 27630799 PRJNA641991_S_NODE_6844_length_211_cov_0.944444_g6725_i0 PRJNA641991 6844 211 0.944444 1.99277684 Magnoliopsida 3398 Plants Plants 96.7 2.6e-21   NR KAG1359705.1 13894 g6725 i0 62.9 10.9052132701422 70 26 99.5 0 211 2 51 120 KAG1359705.1 putative 60S ribosomal protein L18a [Cocos nucifera] diamond 2301 96.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Arecales Arecaceae Cocos Cocos nucifera
27870833 27870833 PRJNA641991_S_NODE_7545_length_202_cov_1.320261_g7426_i0 PRJNA641991 7545 202 1.320261 2.66692722 Anisodus tanguticus 243964 Plants Plants 88.6 2.3700000000000003e-21   NR KAK4336976.1 243964 g7426 i0 67.7 0.965346534653465 65 21 96.5 0 202 8 5 69 KAK4336976.1 hypothetical protein RND71_044201 [Anisodus tanguticus] diamond 195 88.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Anisodus Anisodus tanguticus
27965576 27965576 PRJNA641991_P_NODE_1805_length_229_cov_1.133333_g1764_i0 PRJNA641991 1805 229 1.133333 2.59533257 Klebsormidium nitens 105231 Plants Plants 53.5 4.31e-6   NR GAQ84155.1 105231 g1764 i0 57.1 1.70305676855895 42 14 55 1 229 104 43 80 GAQ84155.1 hypothetical protein KFL_001780100 [Klebsormidium nitens] diamond 390 53.5 1 Eukaryota   Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiales Klebsormidiaceae Klebsormidium Klebsormidium nitens
28041177 28041177 PRJNA641991_S_NODE_11325_length_171_cov_0.967213_g11206_i0 PRJNA641991 11325 171 0.967213 1.65393423 Magnoliopsida 3398 Plants Plants 49.7 3.09e-5   NR VFQ74999.1 132261 g11206 i0 65.8 11.280701754386 38 13 66.7 0 119 6 54 91 VFQ74999.1 unnamed protein product [Cuscuta campestris] diamond 1929 50.1 0.992015968063872 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Cuscuta Cuscuta campestris
28104081 28104081 PRJNA641991_S_NODE_14705_length_161_cov_0.910714_g14586_i0 PRJNA641991 14705 161 0.910714 1.46624954 Eukaryota 2759 Plants Plants 48.5 1.09e-4   NR KAG9148205.1 34254 g14586 i0 39.6 4.77018633540373 53 32 98.8 0 2 160 181 233 KAG9148205.1 hypothetical protein Leryth_014114 [Lithospermum erythrorhizon] diamond 768 48.9 0.991820040899796 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Boraginales Boraginaceae Lithospermum Lithospermum erythrorhizon
28325168 28325168 PRJNA641991_S_NODE_12946_length_165_cov_0.879310_g12827_i0 PRJNA641991 12946 165 0.87931 1.4508615 Eukaryota 2759 Plants Plants 100 4.189999999999999e-23   NR KDO86092.1 2711 g12827 i0 81.5 454.418181818182 54 10 98.2 0 3 164 379 432 KDO86092.1 hypothetical protein CISIN_1g011065mg [Citrus sinensis] diamond 74979 101 0.99009900990099 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
28660386 28660386 PRJNA641991_S_NODE_1487_length_432_cov_1.203655_g1368_i0 PRJNA641991 1487 432 1.203655 5.1997896 Hordeum vulgare subsp. vulgare 112509 Plants Plants 46.6 0.00834   NR BAK00444.1 112509 g1368 i0 68.3 0.284722222222222 41 8 28.5 2 432 310 201 236 BAK00444.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 123 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28767241 28767241 PRJNA641991_S_NODE_13807_length_163_cov_0.894737_g13688_i0 PRJNA641991 13807 163 0.894737 1.45842131 Eukaryota 2759 Plants Plants 93.6 1.57e-20   NR BAK02833.1 112509 g13688 i0 94.4 3.97546012269939 54 3 99.4 0 162 1 721 774 BAK02833.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 648 93.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
29575696 29575696 PRJNA641991_S_NODE_3190_length_295_cov_6.813008_g3071_i0 PRJNA641991 3190 295 6.813008 20.0983736 Rubroshorea leprosula 152421 Plants Plants 53.5 4.01e-6   NR GKV53457.1 152421 g3071 i0 66.7 0.84406779661017 42 14 42.7 0 294 169 123 164 GKV53457.1 hypothetical protein SLEP1_g59979 [Rubroshorea leprosula] diamond 249 53.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Rubroshorea Rubroshorea leprosula
29809143 29809143 PRJNA641991_S_NODE_13771_length_163_cov_0.894737_g13652_i0 PRJNA641991 13771 163 0.894737 1.45842131 Viridiplantae 33090 Plants Plants 62.4 1.21e-10   NR ADB81473.1 3175 g13652 i0 62.2 12.239263803681 45 17 82.8 0 140 6 67 111 ADB81473.1 60S ribosomal protein L17, partial [Klebsormidium flaccidum] diamond 1995 62.4 1 Eukaryota   Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiales Klebsormidiaceae Klebsormidium Klebsormidium flaccidum
30219853 30219853 PRJNA641991_S_NODE_4612_length_249_cov_1.530000_g4493_i0 PRJNA641991 4612 249 1.53 3.8097 Eukaryota 2759 Plants Plants 44.3 0.00224   NR CAK8537586.1 3860 g4493 i0 78.3 2.3855421686747 23 5 27.7 0 249 181 69 91 CAK8537586.1 unnamed protein product [Lathyrus sativus] diamond 594 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lathyrus Lathyrus sativus
30397696 30397696 PRJNA641991_S_NODE_2873_length_311_cov_1.526718_g2754_i0 PRJNA641991 2873 311 1.526718 4.74809298 Hordeum vulgare subsp. vulgare 112509 Plants Plants 156 2.34e-42   NR BAK01753.1 112509 g2754 i0 81.6 2.98070739549839 103 17 99.4 1 311 3 194 294 BAK01753.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 927 156 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
30429181 30429181 PRJNA641991_S_NODE_11733_length_168_cov_1.285714_g11614_i0 PRJNA641991 11733 168 1.285714 2.15999952 Amaranthus tricolor 29722 Plants Plants 66.6 4.71e-11   NR XP_057525907.1 29722 g11614 i0 56 0.892857142857143 50 22 89.3 0 167 18 279 328 XP_057525907.1 WD-40 repeat-containing protein MSI2-like [Amaranthus tricolor] diamond 150 66.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Amaranthaceae Amaranthus Amaranthus tricolor
30460813 30460813 PRJNA641991_S_NODE_12953_length_165_cov_0.879310_g12834_i0 PRJNA641991 12953 165 0.87931 1.4508615 Hordeum vulgare subsp. vulgare 112509 Plants Plants 62.8 1.09e-9   NR BAJ99674.1 112509 g12834 i0 54.4 3.14545454545455 57 22 96.4 1 160 2 848 904 BAJ99674.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 519 62.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
30630515 30630515 PRJNA641991_S_NODE_14293_length_162_cov_0.902655_g14174_i0 PRJNA641991 14293 162 0.902655 1.4623011 Eukaryota 2759 Plants Plants 83.6 5.17e-17   NR XP_062193425.1 29695 g14174 i0 79.2 83.4259259259259 53 11 98.1 0 4 162 497 549 XP_062193425.1 transmembrane 9 superfamily member 9-like isoform X2 [Phragmites australis] diamond 13515 84.3 0.991696322657177 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Phragmites Phragmites australis
30871124 30871124 PRJNA641991_S_NODE_6134_length_220_cov_3.222222_g6015_i0 PRJNA641991 6134 220 3.222222 7.0888884 Lotus japonicus 34305 Plants Plants 42.7 0.0267   NR XP_057431123.1 34305 g6015 i0 41.3 0.627272727272727 46 22 62.7 1 24 161 357 397 XP_057431123.1 linamarin synthase 1-like [Lotus japonicus] diamond 138 42.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
31092279 31092279 PRJNA641991_P_NODE_3675_length_165_cov_0.844828_g3634_i0 PRJNA641991 3675 165 0.844828 1.3939662 Marchantia paleacea 56867 Plants Plants 46.6 5.72e-4   NR KAG6557673.1 56867 g3634 i0 57.9 1.30909090909091 38 16 69.1 0 1 114 144 181 KAG6557673.1 hypothetical protein Mapa_000436 [Marchantia paleacea] diamond 216 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Marchantiaceae Marchantia Marchantia paleacea
31673698 31673698 PRJNA641991_S_NODE_6097_length_221_cov_1.412791_g5978_i0 PRJNA641991 6097 221 1.412791 3.12226811 Eukaryota 2759 Plants Plants 100 4.03e-25   NR RWW26774.1 4639 g5978 i0 76.7 39.0814479638009 60 14 81.4 0 217 38 19 78 RWW26774.1 hypothetical protein GW17_00008824 [Ensete ventricosum] diamond 8637 100 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Ensete Ensete ventricosum
31863423 31863423 PRJNA641991_P_NODE_4077_length_162_cov_0.902655_g4036_i0 PRJNA641991 4077 162 0.902655 1.4623011 Eukaryota 2759 Plants Plants 114 8.43e-28   NR BAK01753.1 112509 g4036 i0 100 10.7962962962963 53 0 98.1 0 3 161 464 516 BAK01753.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 1749 114 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
32104386 32104386 PRJNA641991_S_NODE_6918_length_210_cov_0.950311_g6799_i0 PRJNA641991 6918 210 0.950311 1.9956531 Hordeum vulgare subsp. vulgare 112509 Plants Plants 55.1 7.03e-7   NR BAK00444.1 112509 g6799 i0 59.7 3.58571428571429 62 23 88.6 2 24 209 90 149 BAK00444.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 753 55.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
32294619 32294619 PRJNA641991_S_NODE_12739_length_165_cov_1.758621_g12620_i0 PRJNA641991 12739 165 1.758621 2.90172465 Hordeum vulgare subsp. vulgare 112509 Plants Plants 97.1 9.46e-22   NR BAJ93696.1 112509 g12620 i0 92.3 2.87272727272727 52 4 94.5 0 3 158 590 641 BAJ93696.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 474 97.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
32338449 32338449 PRJNA641991_S_NODE_13999_length_163_cov_0.868421_g13880_i0 PRJNA641991 13999 163 0.868421 1.41552623 Eukaryota 2759 Plants Plants 55.5 4.11e-7   NR XP_024361801.1 3218 g13880 i0 46.6 7.21472392638037 58 27 99.4 1 2 163 277 334 XP_024361801.1 protein RCC2 homolog isoform X2 [Physcomitrium patens] diamond 1176 55.8 0.99462365591397806 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
32767807 32767807 PRJNA641991_S_NODE_7380_length_204_cov_0.987097_g7261_i0 PRJNA641991 7380 204 0.987097 2.01367788 Lotus japonicus 34305 Plants Plants 105 8.67e-27   NR AFK39667.1 34305 g7261 i0 96.4 0.823529411764706 56 2 82.4 0 169 2 2 57 AFK39667.1 unknown [Lotus japonicus] diamond 168 105 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;