RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA641991" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641991 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19744602 19744602 PRJNA641991_P_NODE_3256_length_167_cov_0.864407_g3215_i0 PRJNA641991 3256 167 0.864407 1.44355969 Owenia fusiformis 6347 Annelida Annelida 93.2 8.550000000000001e-21   NR CAH1786744.1 6347 g3215 i0 80.4 3.64670658682635 51 10 91.6 0 15 167 301 351 CAH1786744.1 unnamed protein product, partial [Owenia fusiformis] diamond 609 93.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30649729 30649729 PRJNA641991_S_NODE_14313_length_162_cov_0.902655_g14194_i0 PRJNA641991 14313 162 0.902655 1.4623011 Owenia fusiformis 6347 Annelida Annelida 52 4.04e-6   NR CAH1787259.1 6347 g14194 i0 53.8 23.0185185185185 52 24 96.3 0 2 157 77 128 CAH1787259.1 unnamed protein product [Owenia fusiformis] diamond 3729 52 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32653870 32653870 PRJNA641991_S_NODE_13180_length_164_cov_1.773913_g13061_i0 PRJNA641991 13180 164 1.773913 2.90921732 Metazoa 33208 Annelida Annelida 87.4 1.55e-18   NR KAI0223160.1 104711 g13061 i0 64.8 3.95121951219512 54 19 98.8 0 163 2 144 197 KAI0223160.1 DnaJ-like protein subfamily A member 1 [Lamellibrachia satsuma] diamond 648 87.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Lamellibrachia Lamellibrachia satsuma

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;