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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA641707 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26840635 26840635 PRJNA641707_P_NODE_315461_length_159_cov_8.936364_g312798_i0 PRJNA641707 315461 159 8.936364 14.20881876 Archaea 2157 Archaea Archaea 63.9 3.89e-10   NR MEM1633972.1 2268200 g312798 i0 57.1 1.84905660377358 49 20 92.5 1 9 155 594 641 MEM1633972.1 hypothetical protein [Sulfolobales archaeon] diamond 294 63.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales     Sulfolobales archaeon
27535921 27535921 PRJNA641707_P_NODE_114543_length_246_cov_2.187817_g111880_i0 PRJNA641707 114543 246 2.187817 5.38202982 Thermoproteati 1783275 Archaea Archaea 72.4 2.96e-13   NR MDP9498592.1 2056631 g111880 i0 100 1.20731707317073 33 0 40.2 0 3 101 127 159 MDP9498592.1 Glu/Leu/Phe/Val dehydrogenase [Thermoproteota archaeon] diamond 297 72.4 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28628859 28628859 PRJNA641707_P_NODE_323627_length_156_cov_7.794393_g320964_i0 PRJNA641707 323627 156 7.794393 12.15925308 Desulfurococcaceae archaeon 2184738 Archaea Archaea 69.7 1.51e-12   NR MEM4557784.1 2184738 g320964 i0 73.5 0.942307692307692 49 13 94.2 0 5 151 14 62 MEM4557784.1 hypothetical protein [Desulfurococcaceae archaeon] diamond 147 69.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae   Desulfurococcaceae archaeon
30334400 30334400 PRJNA641707_P_NODE_65652_length_260_cov_14.573460_g62989_i0 PRJNA641707 65652 260 14.57346 37.890996 Sulfolobus sp. SCGC AB-777_L 2288 Archaea Archaea 42.7 0.0426   NR PVU70735.1 1987492 g62989 i0 39.2 0.588461538461538 51 31 58.8 0 1 153 218 268 PVU70735.1 hypothetical protein DDW09_01750, partial [Sulfolobus sp. SCGC AB-777_L09] diamond 153 42.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus sp. SCGC AB-777_L09
31642030 31642030 PRJNA641707_P_NODE_75056_length_246_cov_14.421320_g72393_i0 PRJNA641707 75056 246 14.42132 35.4764472 Thermoproteati 1783275 Archaea Archaea 67.8 1.98e-11   NR MDQ5868985.1 2056631 g72393 i0 100 1.17073170731707 32 0 39 0 5 100 1 32 MDQ5868985.1 nucleotidyltransferase family protein [Thermoproteota archaeon] diamond 288 67.8 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
31882733 31882733 PRJNA641707_P_NODE_280817_length_170_cov_3.578512_g278154_i0 PRJNA641707 280817 170 3.578512 6.0834704 Pyrobaculum sp. 2004705 Archaea Archaea 63.9 4.59e-10   NR MEM0369681.1 2004705 g278154 i0 48.2 5.85882352941176 56 29 98.8 0 169 2 302 357 MEM0369681.1 serine/threonine-protein kinase [Pyrobaculum sp.] diamond 996 63.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum sp.
32767732 32767732 PRJNA641707_P_NODE_300840_length_164_cov_3.139130_g298177_i0 PRJNA641707 300840 164 3.13913 5.1481732 Thermofilaceae archaeon 2268203 Archaea Archaea 78.2 4.08e-15   NR MEM2591090.1 2268203 g298177 i0 71.7 0.969512195121951 53 15 97 0 5 163 672 724 MEM2591090.1 TonB-dependent receptor [Thermofilaceae archaeon] diamond 159 78.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermofilales Thermofilaceae   Thermofilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;