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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA641707 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26954314 26954314 PRJNA641707_P_NODE_139242_length_242_cov_4.673575_g136579_i0 PRJNA641707 139242 242 4.673575 11.3100515 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 69.3 1.58e-11   NR WP_299077977.1 1678694 g136579 i0 100 0.396694214876033 32 0 39.7 0 98 3 452 483 WP_299077977.1 hypothetical protein [uncultured Fretibacterium sp.] diamond 96 69.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
27334169 27334169 PRJNA641707_P_NODE_236123_length_188_cov_2.956835_g233460_i0 PRJNA641707 236123 188 2.956835 5.5588498 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 84.7 2.6e-18   NR WP_366797263.1 1678694 g233460 i0 97.7 0.702127659574468 44 1 70.2 0 2 133 179 222 WP_366797263.1 GntR family transcriptional regulator [uncultured Fretibacterium sp.] diamond 132 84.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
27491976 27491976 PRJNA641707_P_NODE_223083_length_192_cov_7.748252_g220420_i0 PRJNA641707 223083 192 7.748252 14.87664384 Fretibacterium sp. OH122 2699746 Bacteria Bacteria 63.2 4.09e-11   NR WP_124887807.1 2491047 g220420 i0 84.8 0.515625 33 5 51.6 0 100 2 12 44 WP_124887807.1 hypothetical protein [Fretibacterium sp. OH1220_COT-178] diamond 99 63.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium sp. OH1220_COT-178
28439290 28439290 PRJNA641707_P_NODE_242806_length_185_cov_5.816176_g240143_i0 PRJNA641707 242806 185 5.816176 10.7599256 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 53.9 1.88e-6   NR WP_299077979.1 1678694 g240143 i0 92.6 0.437837837837838 27 2 43.8 0 158 78 320 346 WP_299077979.1 hypothetical protein [uncultured Fretibacterium sp.] diamond 81 53.9 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
28470757 28470757 PRJNA641707_P_NODE_119326_length_245_cov_8.734694_g116663_i0 PRJNA641707 119326 245 8.734694 21.4000003 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 106 1.67e-24   NR WP_299077977.1 1678694 g116663 i0 56.4 1.3469387755102 110 17 96.7 1 7 243 102 211 WP_299077977.1 hypothetical protein [uncultured Fretibacterium sp.] diamond 330 106 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
29701758 29701758 PRJNA641707_P_NODE_269770_length_174_cov_5.736000_g267107_i0 PRJNA641707 269770 174 5.736 9.98064 Synergistaceae bacterium 2053624 Bacteria Bacteria 49.3 3.17e-5   NR MDR1377431.1 2053624 g267107 i0 55.3 0.655172413793103 38 17 65.5 0 121 8 110 147 MDR1377431.1 prepilin-type N-terminal cleavage/methylation domain-containing protein [Synergistaceae bacterium] diamond 114 49.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30018129 30018129 PRJNA641707_P_NODE_331571_length_154_cov_2.142857_g328908_i0 PRJNA641707 331571 154 2.142857 3.29999978 Jonquetella 428711 Bacteria Bacteria 102 5.639999999999999e-24   NR WP_008522537.1 428711 g328908 i0 96.1 0.993506493506494 51 1 97.4 1 150 1 325 375 WP_008522537.1 MULTISPECIES: S-layer homology domain-containing protein [Jonquetella] diamond 153 102 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Jonquetella  
30080862 30080862 PRJNA641707_P_NODE_121972_length_245_cov_6.122449_g119309_i0 PRJNA641707 121972 245 6.122449 15.00000005 Fretibacterium sp. OH122 2699746 Bacteria Bacteria 60.5 1.08e-8   NR WP_124887432.1 2491047 g119309 i0 78.1 0.391836734693878 32 7 39.2 0 96 1 108 139 WP_124887432.1 acetyltransferase [Fretibacterium sp. OH1220_COT-178] diamond 96 60.5 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium sp. OH1220_COT-178
30776291 30776291 PRJNA641707_P_NODE_175514_length_200_cov_12.178808_g172851_i0 PRJNA641707 175514 200 12.178808 24.357616 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 103 1.4599999999999999e-24   NR WP_299077979.1 1678694 g172851 i0 92.2 0.96 64 2 91.5 2 198 16 127 190 WP_299077979.1 hypothetical protein [uncultured Fretibacterium sp.] diamond 192 103 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
31629849 31629849 PRJNA641707_P_NODE_331456_length_154_cov_2.333333_g328793_i0 PRJNA641707 331456 154 2.333333 3.59333282 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 86.7 2.55e-18   NR WP_299300692.1 1678694 g328793 i0 100 0.779220779220779 40 0 77.9 0 6 125 368 407 WP_299300692.1 M20 family metallo-hydrolase [uncultured Fretibacterium sp.] diamond 120 86.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
31692924 31692924 PRJNA641707_P_NODE_172357_length_201_cov_5.072368_g169694_i0 PRJNA641707 172357 201 5.072368 10.19545968 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 64.3 1.95e-10   NR WP_299078624.1 1678694 g169694 i0 97 0.492537313432836 33 1 49.3 0 195 97 155 187 WP_299078624.1 nitroreductase family protein [uncultured Fretibacterium sp.] diamond 99 64.3 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
32104188 32104188 PRJNA641707_P_NODE_132398_length_243_cov_15.587629_g129735_i0 PRJNA641707 132398 243 15.587629 37.87793847 Synergistales bacterium 2268201 Bacteria Bacteria 46.2 0.00221   NR GHV41578.1 2268201 g129735 i0 61.3 0.790123456790123 31 12 38.3 0 94 2 78 108 GHV41578.1 hypothetical protein FACS1894187_23390 [Synergistales bacterium] diamond 192 46.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium
32199320 32199320 PRJNA641707_P_NODE_290118_length_167_cov_2.779661_g287455_i0 PRJNA641707 290118 167 2.779661 4.64203387 uncultured Fretibacterium sp. 1678694 Bacteria Bacteria 108 6.41e-26   NR WP_299298144.1 1678694 g287455 i0 96.2 0.934131736526946 52 2 93.4 0 159 4 679 730 WP_299298144.1 right-handed parallel beta-helix repeat-containing protein [uncultured Fretibacterium sp.] diamond 156 108 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;