contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Parabasalia"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26891596 | 26891596 | PRJNA641707_P_NODE_331141_length_154_cov_2.780952_g328478_i0 | PRJNA641707 | 331141 | 154 | 2.780952 | 4.28266608 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 47 | 3.41e-4 | NR | XP_068350151.1 | 1144522 | g328478 | i0 | 43.1 | 3.25324675324675 | 51 | 28 | 97.4 | 1 | 3 | 152 | 182 | 232 | XP_068350151.1 AGC family protein kinase [Tritrichomonas foetus] | diamond | 501 | 47 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 27302615 | 27302615 | PRJNA641707_P_NODE_64943_length_262_cov_7.399061_g62280_i0 | PRJNA641707 | 64943 | 262 | 7.399061 | 19.38553982 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 51.2 | 3e-5 | NR | XP_068348527.1 | 1144522 | g62280 | i0 | 36.9 | 2.54198473282443 | 65 | 37 | 69.8 | 1 | 186 | 4 | 42 | 106 | XP_068348527.1 uncharacterized protein TRFO_10524 [Tritrichomonas foetus] | diamond | 666 | 51.2 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 27744781 | 27744781 | PRJNA641707_P_NODE_231584_length_189_cov_10.792857_g228921_i0 | PRJNA641707 | 231584 | 189 | 10.792857 | 20.39849973 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 46.6 | 8.22e-4 | NR | XP_068362926.1 | 1144522 | g228921 | i0 | 39.7 | 0.920634920634921 | 58 | 35 | 92.1 | 0 | 174 | 1 | 418 | 475 | XP_068362926.1 uncharacterized protein TRFO_21131 [Tritrichomonas foetus] | diamond | 174 | 46.6 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 28597136 | 28597136 | PRJNA641707_P_NODE_240187_length_186_cov_6.131387_g237524_i0 | PRJNA641707 | 240187 | 186 | 6.131387 | 11.40437982 | Histomonas meleagridis | 135588 | Parabasalia | other_Eukaryota | 53.9 | 1.96e-6 | NR | XP_067773816.1 | 135588 | g237524 | i0 | 42.4 | 1.90322580645161 | 59 | 34 | 95.2 | 0 | 5 | 181 | 782 | 840 | XP_067773816.1 putative alpha-actinin [Histomonas meleagridis] | diamond | 354 | 53.9 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Dientamoebidae | Histomonas | Histomonas meleagridis | |||
| 28944678 | 28944678 | PRJNA641707_P_NODE_316628_length_159_cov_4.254545_g313965_i0 | PRJNA641707 | 316628 | 159 | 4.254545 | 6.76472655 | Trichomonas vaginalis G3 | 412133 | Parabasalia | other_Eukaryota | 52.8 | 3.44e-6 | NR | XP_001319262.1 | 412133 | g313965 | i0 | 49 | 0.924528301886792 | 49 | 25 | 92.5 | 0 | 153 | 7 | 143 | 191 | XP_001319262.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] | diamond | 147 | 52.8 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 30270890 | 30270890 | PRJNA641707_P_NODE_143112_length_241_cov_3.635417_g140449_i0 | PRJNA641707 | 143112 | 241 | 3.635417 | 8.76135497 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 46.6 | 0.00153 | NR | XP_068360373.1 | 1144522 | g140449 | i0 | 73.3 | 1.51867219917012 | 30 | 8 | 37.3 | 0 | 92 | 3 | 320 | 349 | XP_068360373.1 Copine family protein [Tritrichomonas foetus] | diamond | 366 | 46.6 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus | |||
| 31661226 | 31661226 | PRJNA641707_P_NODE_238137_length_187_cov_4.797101_g235474_i0 | PRJNA641707 | 238137 | 187 | 4.797101 | 8.97057887 | Histomonas meleagridis | 135588 | Parabasalia | other_Eukaryota | 48.1 | 1.66e-4 | NR | XP_067771334.1 | 135588 | g235474 | i0 | 40 | 1.25133689839572 | 45 | 27 | 72.2 | 0 | 185 | 51 | 52 | 96 | XP_067771334.1 YEATS domain-containing protein 4 [Histomonas meleagridis] | diamond | 234 | 48.1 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Dientamoebidae | Histomonas | Histomonas meleagridis | |||
| 32167741 | 32167741 | PRJNA641707_P_NODE_181718_length_200_cov_3.364238_g179055_i0 | PRJNA641707 | 181718 | 200 | 3.364238 | 6.728476 | Trichomonas vaginalis G3 | 412133 | Parabasalia | other_Eukaryota | 44.7 | 0.0045 | NR | XP_001326806.1 | 412133 | g179055 | i0 | 57.9 | 0.57 | 38 | 16 | 57 | 0 | 197 | 84 | 695 | 732 | XP_001326806.1 PHOSPHATIDYLINOSITOL KINASE family [Trichomonas vaginalis G3] | diamond | 114 | 44.7 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 32830834 | 32830834 | PRJNA641707_P_NODE_309820_length_161_cov_24.598214_g307157_i0 | PRJNA641707 | 309820 | 161 | 24.598214 | 39.60312454 | Tritrichomonas foetus | 1144522 | Parabasalia | other_Eukaryota | 53.9 | 1.29e-6 | NR | XP_068353661.1 | 1144522 | g307157 | i0 | 60 | 4.99378881987578 | 40 | 16 | 74.5 | 0 | 159 | 40 | 126 | 165 | XP_068353661.1 Cell division control protein 2 like protein [Tritrichomonas foetus] | diamond | 804 | 53.9 | 1 | Eukaryota | Metamonada | Parabasalia | Tritrichomonadida | Tritrichomonadidae | Tritrichomonas | Tritrichomonas foetus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;