RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Heterolobosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA641707 · 19 ✖

analysis 1

  • diamond · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27409770 27409770 PRJNA641707_P_NODE_158223_length_219_cov_2.158824_g155560_i0 PRJNA641707 158223 219 2.158824 4.72782456 Naegleria 5761 Heterolobosea other_Eukaryota 120 1.63e-29   NR XP_002679683.1 5762 g155560 i0 77.8 9.86301369863014 72 16 98.6 0 217 2 5238 5309 XP_002679683.1 midasin [Naegleria gruberi] diamond 2160 120 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27428945 27428945 PRJNA641707_P_NODE_116203_length_246_cov_1.736041_g113540_i0 PRJNA641707 116203 246 1.736041 4.27066086 Acrasis kona 1008807 Heterolobosea other_Eukaryota 57 6.28e-8   NR KAL0481681.1 1008807 g113540 i0 37.3 1.24390243902439 102 26 78 1 194 3 1 102 KAL0481681.1 ribosomal protein S12 [Acrasis kona] diamond 306 57 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27902153 27902153 PRJNA641707_P_NODE_209145_length_195_cov_15.732877_g206482_i0 PRJNA641707 209145 195 15.732877 30.67911015 Acrasis kona 1008807 Heterolobosea other_Eukaryota 46.6 8.51e-4   NR KAL0480502.1 1008807 g206482 i0 53.1 0.984615384615385 32 15 49.2 0 6 101 480 511 KAL0480502.1 sensor of blue-light using FAD [Acrasis kona] diamond 192 46.6 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28123431 28123431 PRJNA641707_P_NODE_252465_length_181_cov_5.386364_g249802_i0 PRJNA641707 252465 181 5.386364 9.74931884 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 55.8 3.9e-7   NR XP_044544958.1 51637 g249802 i0 43.3 0.994475138121547 60 32 99.4 1 181 2 185 242 XP_044544958.1 uncharacterized protein C9374_009212 [Naegleria lovaniensis] diamond 180 55.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
28798608 28798608 PRJNA641707_P_NODE_122047_length_245_cov_6.056122_g119384_i0 PRJNA641707 122047 245 6.056122 14.8374989 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67.4 5.52e-11   NR XP_002668652.1 5762 g119384 i0 87.9 1.60408163265306 33 4 40.4 0 244 146 186 218 XP_002668652.1 uncharacterized protein NAEGRDRAFT_60075 [Naegleria gruberi] diamond 393 67.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29007769 29007769 PRJNA641707_P_NODE_212208_length_195_cov_5.226027_g209545_i0 PRJNA641707 212208 195 5.226027 10.19075265 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 63.2 1.26e-9   NR XP_002677193.1 5762 g209545 i0 41 1.27692307692308 83 30 98.5 1 4 195 294 376 XP_002677193.1 acyl CoA synthetase [Naegleria gruberi] diamond 249 63.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29259794 29259794 PRJNA641707_P_NODE_134909_length_243_cov_5.371134_g132246_i0 PRJNA641707 134909 243 5.371134 13.05185562 Acrasis kona 1008807 Heterolobosea other_Eukaryota 69.3 1.56e-11   NR KAL0488182.1 1008807 g132246 i0 47.4 0.962962962962963 78 34 96.3 1 241 8 12 82 KAL0488182.1 hypothetical protein AKO1_015382 [Acrasis kona] diamond 234 69.3 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29670166 29670166 PRJNA641707_P_NODE_264230_length_176_cov_7.795276_g261567_i0 PRJNA641707 264230 176 7.795276 13.71968576 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 62.4 1.73e-9   NR XP_044562829.1 5763 g261567 i0 70.6 0.579545454545455 34 10 58 0 104 3 315 348 XP_044562829.1 uncharacterized protein FDP41_002631 [Naegleria fowleri] diamond 102 62.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30302731 30302731 PRJNA641707_P_NODE_216872_length_194_cov_4.793103_g214209_i0 PRJNA641707 216872 194 4.793103 9.29861982 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 42.7 0.0199   NR XP_044558623.1 5763 g214209 i0 36.7 1.85567010309278 60 38 92.8 0 5 184 423 482 XP_044558623.1 uncharacterized protein FDP41_007297 [Naegleria fowleri] diamond 360 42.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30491843 30491843 PRJNA641707_P_NODE_121793_length_245_cov_6.255102_g119130_i0 PRJNA641707 121793 245 6.255102 15.3249999 Acrasis kona 1008807 Heterolobosea other_Eukaryota 60.1 2.87e-8   NR KAL0491625.1 1008807 g119130 i0 79.3 1.07755102040816 29 6 35.5 0 231 145 48 76 KAL0491625.1 cathepsin A [Acrasis kona] diamond 264 60.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30586540 30586540 PRJNA641707_P_NODE_300493_length_164_cov_3.869565_g297830_i0 PRJNA641707 300493 164 3.869565 6.3460866 Acrasis kona 1008807 Heterolobosea other_Eukaryota 80.9 4.59e-16   NR KAL0491632.1 1008807 g297830 i0 69.8 0.969512195121951 53 16 97 0 159 1 232 284 KAL0491632.1 vacuolar protein sorting protein VPS1 [Acrasis kona] diamond 159 80.9 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30788638 30788638 PRJNA641707_P_NODE_336494_length_152_cov_3.126214_g333831_i0 PRJNA641707 336494 152 3.126214 4.75184528 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 8.55e-7   NR KAL0480924.1 1008807 g333831 i0 52.4 7.42105263157895 42 20 82.9 0 7 132 172 213 KAL0480924.1 type I protein arginine methyltransferase PRMT1 [Acrasis kona] diamond 1128 54.7 0.992687385740402 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30915129 30915129 PRJNA641707_P_NODE_186294_length_199_cov_7.420000_g183631_i0 PRJNA641707 186294 199 7.42 14.7658 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 6.669999999999999e-23   NR XP_002681941.1 5762 g183631 i0 73.8 3.58793969849246 61 16 92 0 16 198 352 412 XP_002681941.1 SANT domain-containing protein [Naegleria gruberi] diamond 714 100 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30915141 30915141 PRJNA641707_P_NODE_223174_length_192_cov_7.503497_g220511_i0 PRJNA641707 223174 192 7.503497 14.40671424 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.8 4.02e-7   NR XP_002668850.1 5762 g220511 i0 52.5 3.953125 61 16 75 1 187 44 74 134 XP_002668850.1 uncharacterized protein NAEGRDRAFT_76225 [Naegleria gruberi] diamond 759 56.2 0.99288256227758 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31167455 31167455 PRJNA641707_P_NODE_40715_length_341_cov_11.321918_g38074_i0 PRJNA641707 40715 341 11.321918 38.60774038 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 94.7 5.87e-22   NR XP_044558447.1 5763 g38074 i0 75.8 4.82111436950147 62 14 53.7 1 11 193 57 118 XP_044558447.1 uncharacterized protein FDP41_007121 [Naegleria fowleri] diamond 1644 94.7 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31420685 31420685 PRJNA641707_P_NODE_107736_length_246_cov_3.197970_g105073_i0 PRJNA641707 107736 246 3.19797 7.8670062 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 49.3 1.93e-4   NR XP_002679174.1 5762 g105073 i0 68.8 1.17073170731707 32 10 39 0 7 102 128 159 XP_002679174.1 uncharacterized protein NAEGRDRAFT_65383 [Naegleria gruberi] diamond 288 49.7 0.991951710261569 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31439881 31439881 PRJNA641707_P_NODE_217056_length_194_cov_4.400000_g214393_i0 PRJNA641707 217056 194 4.4 8.536 Acrasis kona 1008807 Heterolobosea other_Eukaryota 44.3 0.00573   NR KAL0479463.1 1008807 g214393 i0 47.1 1.11340206185567 34 18 52.6 0 125 24 2321 2354 KAL0479463.1 dynein beta chain [Acrasis kona] diamond 216 44.3 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
31503398 31503398 PRJNA641707_P_NODE_229676_length_190_cov_6.517730_g227013_i0 PRJNA641707 229676 190 6.51773 12.383687 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 52 9.73e-6   NR XP_002674784.1 5762 g227013 i0 64.9 0.58421052631579 37 12 58.4 1 6 116 628 663 XP_002674784.1 succinate dehydrogenase [Naegleria gruberi] diamond 111 52 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32180103 32180103 PRJNA641707_P_NODE_219758_length_193_cov_7.041667_g217095_i0 PRJNA641707 219758 193 7.041667 13.59041731 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.5 1.6e-10   NR XP_044568198.1 5763 g217095 i0 81.8 10.259067357513 33 6 51.3 0 101 3 114 146 XP_044568198.1 uncharacterized protein FDP41_010550 [Naegleria fowleri] diamond 1980 65.9 0.993930197268589 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;