RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27365873 27365873 PRJNA641707_P_NODE_189583_length_199_cov_3.806667_g186920_i0 PRJNA641707 189583 199 3.806667 7.57526733 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 70.9 2.55e-12   NR MCE2432431.1 2053570 g186920 i0 86 45.6633165829146 43 1 64.8 2 193 65 157 194 MCE2432431.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Candidatus Latescibacterota bacterium] diamond 9087 70.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28502325 28502325 PRJNA641707_P_NODE_211967_length_195_cov_5.630137_g209304_i0 PRJNA641707 211967 195 5.630137 10.97876715 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 57.8 9.99e-8   NR UCE02226.1 2053570 g209304 i0 44.4 1.96923076923077 63 35 96.9 0 189 1 137 199 UCE02226.1 MAG: leucyl aminopeptidase family protein [Candidatus Latescibacterota bacterium] diamond 384 57.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29967193 29967193 PRJNA641707_P_NODE_248471_length_183_cov_2.656716_g245808_i0 PRJNA641707 248471 183 2.656716 4.86179028 FCB group 1783270 Bacteria Bacteria 43.5 0.00307   NR OPX32995.1 1956174 g245808 i0 63.3 8.27868852459016 30 11 49.2 0 93 4 1 30 OPX32995.1 MAG: hypothetical protein B1H40_01125 [Candidatus Latescibacteria bacterium 4484_181] diamond 1515 43.9 0.990888382687927 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacteria bacterium 4484_181

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;