RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Candidatus Dormiibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Dormiibacterota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA641707 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6261101 6261101 PRJNA641707_P_NODE_288625_length_167_cov_6.694915_g285962_i0 PRJNA641707 288625 167 6.694915 11.18050805 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 92 2.53e-20   NR HSS93925.1 2052315 g285962 i0 81.1 3.80838323353293 53 10 95.2 0 165 7 170 222 HSS93925.1 IS3 family transposase [Candidatus Dormiibacterota bacterium] diamond 636 92 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
30523447 30523447 PRJNA641707_P_NODE_267013_length_175_cov_6.515873_g264350_i0 PRJNA641707 267013 175 6.515873 11.40277775 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 85.5 1.12e-17   NR HVS47516.1 2052315 g264350 i0 72.2 2.81142857142857 54 15 92.6 0 167 6 105 158 HVS47516.1 alkaline phosphatase family protein [Candidatus Dormiibacterota bacterium] diamond 492 85.5 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31629817 31629817 PRJNA641707_P_NODE_274116_length_172_cov_9.764228_g271453_i0 PRJNA641707 274116 172 9.764228 16.79447216 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 93.6 5.83e-21   NR HSP99174.1 2052315 g271453 i0 78.6 1.91860465116279 56 12 97.7 0 170 3 63 118 HSP99174.1 radical SAM protein [Candidatus Dormiibacterota bacterium] diamond 330 93.6 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;