RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12635502 12635502 PRJNA641707_P_NODE_164970_length_203_cov_30.448052_g162307_i0 PRJNA641707 164970 203 30.448052 61.80954556 Pseudomonadati 3379134 Bacteria Bacteria 110 1.6600000000000002e-26   NR TVQ64626.1 2053516 g162307 i0 65.4 26.512315270936 78 15 97.5 1 198 1 228 305 TVQ64626.1 MAG: chromosomal replication initiator protein DnaA [Balneolaceae bacterium] diamond 5382 111 0.990990990990991 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
26732643 26732643 PRJNA641707_P_NODE_45601_length_321_cov_5.371324_g42950_i0 PRJNA641707 45601 321 5.371324 17.24195004 Balneola sp. 2024824 Bacteria Bacteria 55.8 2.25e-6   NR MBU94439.1 2024824 g42950 i0 29.6 8.83177570093458 135 43 77.6 4 262 14 171 305 MBU94439.1 hypothetical protein [Balneola sp.] diamond 2835 55.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
26764678 26764678 PRJNA641707_P_NODE_62881_length_267_cov_9.151376_g60220_i0 PRJNA641707 62881 267 9.151376 24.43417392 Balneola sp. 2024824 Bacteria Bacteria 43.1 0.0362   NR MEP1151204.1 2024824 g60220 i0 45.3 0.595505617977528 53 26 56.2 1 52 201 297 349 MEP1151204.1 NAD-dependent succinate-semialdehyde dehydrogenase [Balneola sp.] diamond 159 43.1 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
27081141 27081141 PRJNA641707_P_NODE_309242_length_162_cov_0.920354_g306579_i0 PRJNA641707 309242 162 0.920354 1.49097348 Balneola sp. 2024824 Bacteria Bacteria 69.7 3.56e-13   NR MEP1151313.1 2024824 g306579 i0 55.1 2.7037037037037 49 22 90.7 0 149 3 113 161 MEP1151313.1 DinB family protein [Balneola sp.] diamond 438 69.7 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
29259935 29259935 PRJNA641707_P_NODE_337329_length_151_cov_9.196078_g334666_i0 PRJNA641707 337329 151 9.196078 13.88607778 Balneolaceae bacterium 2053516 Bacteria Bacteria 62.4 3.15e-10   NR MDX1586025.1 2053516 g334666 i0 52.1 0.95364238410596 48 23 95.4 0 6 149 15 62 MDX1586025.1 FtsX-like permease family protein [Balneolaceae bacterium] diamond 144 62.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
30915125 30915125 PRJNA641707_P_NODE_181534_length_200_cov_3.549669_g178871_i0 PRJNA641707 181534 200 3.549669 7.099338 Bacteria 2 Bacteria Bacteria 42 0.0342   NR HCT55018.1 2024824 g178871 i0 62.5 1.155 24 9 36 0 190 119 22 45 HCT55018.1 hypothetical protein [Balneola sp.] diamond 231 42 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;