RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Acanthocephala"

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tax_superkingdom 1

tax_phylum 1

  • Acanthocephala · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA641707 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
616584 616584 PRJNA641707_P_NODE_49881_length_305_cov_20.753906_g47224_i0 PRJNA641707 49881 305 20.753906 63.2994133 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 135 1.2e-34   NR KAI0987799.1 141832 g47224 i0 85.5 1.35737704918033 69 10 67.9 0 209 3 315 383 KAI0987799.1 hypothetical protein GJ496_009981 [Pomphorhynchus laevis] diamond 414 135 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
1893041 1893041 PRJNA641707_P_NODE_58662_length_278_cov_8.729258_g56001_i0 PRJNA641707 58662 278 8.729258 24.26733724 Metazoa 33208 Acanthocephala other_Eukaryota 83.6 1.69e-17   NR CAQ37768.1 185727 g56001 i0 84.4 3.26978417266187 45 7 48.6 0 218 84 1 45 CAQ37768.1 40S ribosomal protein S8, partial [Echinorhynchus truttae] diamond 909 84.3 0.991696322657177 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Echinorhynchidae Echinorhynchus Echinorhynchus truttae
28944640 28944640 PRJNA641707_P_NODE_258588_length_178_cov_17.775194_g255925_i0 PRJNA641707 258588 178 17.775194 31.63984532 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 50.4 2.91e-5   NR KAI0987251.1 141832 g255925 i0 89.7 0.48876404494382 29 3 48.9 0 176 90 1158 1186 KAI0987251.1 hypothetical protein GJ496_003370 [Pomphorhynchus laevis] diamond 87 50.4 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis
29259845 29259845 PRJNA641707_P_NODE_203909_length_196_cov_17.843537_g201246_i0 PRJNA641707 203909 196 17.843537 34.97333252 Pomphorhynchus laevis 141832 Acanthocephala other_Eukaryota 55.1 9.07e-7   NR KAI0986617.1 141832 g201246 i0 60.6 0.505102040816326 33 13 50.5 0 98 196 681 713 KAI0986617.1 hypothetical protein GJ496_005558, partial [Pomphorhynchus laevis] diamond 99 55.1 1 Eukaryota Opisthokonta Metazoa Acanthocephala Palaeacanthocephala Echinorhynchida Pomphorhynchidae Pomphorhynchus Pomphorhynchus laevis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;