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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA641707" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 27 ✖

tax_kingdom 1

bioproject 1

  • PRJNA641707 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4442665 4442665 PRJNA641707_P_NODE_283844_length_169_cov_2.750000_g281181_i0 PRJNA641707 283844 169 2.75 4.6475 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 81.6 1.86e-18   NR HEY0076435.1 2800791 g281181 i0 74.1 1.91715976331361 54 14 95.9 0 166 5 3 56 HEY0076435.1 50S ribosomal protein L23 [Abditibacteriaceae bacterium] diamond 324 81.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
4443691 4443691 PRJNA641707_P_NODE_327904_length_155_cov_3.443396_g325241_i0 PRJNA641707 327904 155 3.443396 5.3372638 Abditibacterium 2109263 Bacteria Bacteria 99 1.76e-22   NR WP_157947561.1 1960156 g325241 i0 98 5.80645161290323 50 1 96.8 0 5 154 649 698 WP_157947561.1 transcription-repair coupling factor [Abditibacterium utsteinense] diamond 900 99 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
17194801 17194801 PRJNA641707_P_NODE_62434_length_268_cov_11.082192_g59773_i0 PRJNA641707 62434 268 11.082192 29.70027456 Abditibacterium sp. 2109264 Bacteria Bacteria 88.6 1.01e-19   NR HEX8464743.1 2109264 g59773 i0 59.5 1.54477611940298 79 30 86.2 1 231 1 94 172 HEX8464743.1 fasciclin domain-containing protein [Abditibacterium sp.] diamond 414 88.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
18467349 18467349 PRJNA641707_P_NODE_293015_length_166_cov_4.170940_g290352_i0 PRJNA641707 293015 166 4.17094 6.9237604 Abditibacterium utsteinense 1960156 Bacteria Bacteria 89.4 1.56e-19   NR WP_105482401.1 1960156 g290352 i0 76.4 0.993975903614458 55 13 99.4 0 165 1 100 154 WP_105482401.1 NADPH:quinone reductase [Abditibacterium utsteinense] diamond 165 89.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
24840755 24840755 PRJNA641707_P_NODE_258340_length_179_cov_1.600000_g255677_i0 PRJNA641707 258340 179 1.6 2.864 Abditibacterium utsteinense 1960156 Bacteria Bacteria 105 3.4900000000000006e-27   NR WP_105483736.1 1960156 g255677 i0 100 0.854748603351955 51 0 85.5 0 26 178 1 51 WP_105483736.1 50S ribosomal protein L11 [Abditibacterium utsteinense] diamond 153 105 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
26922935 26922935 PRJNA641707_P_NODE_183362_length_199_cov_15.340000_g180699_i0 PRJNA641707 183362 199 15.34 30.5266 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 86.3 9.74e-18   NR HEX8550976.1 2800791 g180699 i0 48.4 2.84924623115578 95 18 96.5 1 193 2 229 323 HEX8550976.1 acetate--CoA ligase [Abditibacteriaceae bacterium] diamond 567 86.3 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27143886 27143886 PRJNA641707_P_NODE_201242_length_197_cov_6.263514_g198579_i0 PRJNA641707 201242 197 6.263514 12.33912258 Abditibacterium utsteinense 1960156 Bacteria Bacteria 56.6 6.06e-9   NR WP_157947470.1 1960156 g198579 i0 96.3 0.411167512690355 27 1 41.1 0 164 84 1 27 WP_157947470.1 hypothetical protein [Abditibacterium utsteinense] diamond 81 56.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
27334212 27334212 PRJNA641707_P_NODE_309863_length_161_cov_14.875000_g307200_i0 PRJNA641707 309863 161 14.875 23.94875 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 73.6 7.74e-15   NR HEX8834991.1 2800791 g307200 i0 78.7 0.875776397515528 47 10 87.6 0 8 148 99 145 HEX8834991.1 S1 RNA-binding domain-containing protein [Abditibacteriaceae bacterium] diamond 141 73.6 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
27681736 27681736 PRJNA641707_P_NODE_290044_length_167_cov_2.949153_g287381_i0 PRJNA641707 290044 167 2.949153 4.92508551 Abditibacterium utsteinense 1960156 Bacteria Bacteria 53.1 2.81e-6   NR WP_157947692.1 1960156 g287381 i0 54.8 0.754491017964072 42 19 75.4 0 7 132 118 159 WP_157947692.1 type II secretion system protein GspD [Abditibacterium utsteinense] diamond 126 53.1 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
27807814 27807814 PRJNA641707_P_NODE_127724_length_244_cov_9.564103_g125061_i0 PRJNA641707 127724 244 9.564103 23.33641132 Abditibacteriota bacterium 2783868 Bacteria Bacteria 59.3 5.23e-8   NR BCM91669.1 2783868 g125061 i0 96.8 0.737704918032787 31 1 38.1 0 239 147 454 484 BCM91669.1 hypothetical protein IAD21_03544 [Abditibacteriota bacterium] diamond 180 59.3 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
27933989 27933989 PRJNA641707_P_NODE_242005_length_185_cov_10.235294_g239342_i0 PRJNA641707 242005 185 10.235294 18.9352939 Abditibacterium sp. 2109264 Bacteria Bacteria 99 5.52e-24   NR HEX8465368.1 2109264 g239342 i0 81.7 0.972972972972973 60 11 97.3 0 185 6 43 102 HEX8465368.1 hypothetical protein [Abditibacterium sp.] diamond 180 99 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28217887 28217887 PRJNA641707_P_NODE_264806_length_176_cov_5.433071_g262143_i0 PRJNA641707 264806 176 5.433071 9.56220496 Abditibacterium sp. 2109264 Bacteria Bacteria 52.8 1.47e-6   NR HEX9998652.1 2109264 g262143 i0 66.7 1.39772727272727 42 14 71.6 0 128 3 28 69 HEX9998652.1 rhodanese-like domain-containing protein [Abditibacterium sp.] diamond 246 52.8 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28597208 28597208 PRJNA641707_P_NODE_328107_length_155_cov_3.141509_g325444_i0 PRJNA641707 328107 155 3.141509 4.86933895 Abditibacterium sp. 2109264 Bacteria Bacteria 49.3 5.45e-5   NR HEX9997069.1 2109264 g325444 i0 59.1 0.851612903225806 44 18 85.2 0 152 21 496 539 HEX9997069.1 stalk domain-containing protein [Abditibacterium sp.] diamond 132 49.3 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
28849442 28849442 PRJNA641707_P_NODE_275228_length_172_cov_4.552846_g272565_i0 PRJNA641707 275228 172 4.552846 7.83089512 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 62.8 1.23e-9   NR HVF84426.1 2800791 g272565 i0 52.7 6.76744186046512 55 26 95.9 0 8 172 210 264 HVF84426.1 glycoside hydrolase family 15 protein [Abditibacteriaceae bacterium] diamond 1164 62.8 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29259825 29259825 PRJNA641707_P_NODE_169149_length_201_cov_9.868421_g166486_i0 PRJNA641707 169149 201 9.868421 19.83552621 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 62 3.38e-9   NR HVF11230.1 2800791 g166486 i0 68.6 2.08955223880597 35 11 52.2 0 107 3 775 809 HVF11230.1 stalk domain-containing protein [Abditibacteriaceae bacterium] diamond 420 62 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
29745801 29745801 PRJNA641707_P_NODE_288930_length_167_cov_5.644068_g286267_i0 PRJNA641707 288930 167 5.644068 9.42559356 Bacteria 2 Bacteria Bacteria 80.1 8.92e-16   NR MDF2440000.1 2783868 g286267 i0 71.7 1.88622754491018 53 15 95.2 0 160 2 190 242 MDF2440000.1 proteasome-associated ATPase [Abditibacteriota bacterium] diamond 315 80.1 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
30239064 30239064 PRJNA641707_P_NODE_199332_length_197_cov_9.925676_g196669_i0 PRJNA641707 199332 197 9.925676 19.55358172 Abditibacterium sp. 2109264 Bacteria Bacteria 87 3.38e-18   NR HEX9997493.1 2109264 g196669 i0 63.8 3.71573604060914 80 11 94.4 1 190 5 293 372 HEX9997493.1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC [Abditibacterium sp.] diamond 732 87 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
30270932 30270932 PRJNA641707_P_NODE_226572_length_191_cov_6.866197_g223909_i0 PRJNA641707 226572 191 6.866197 13.11443627 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 70.9 1.58e-14   NR HEX8238046.1 2800791 g223909 i0 61.8 0.863874345549738 55 21 86.4 0 187 23 1 55 HEX8238046.1 Flp family type IVb pilin [Abditibacteriaceae bacterium] diamond 165 70.9 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31029342 31029342 PRJNA641707_P_NODE_83235_length_246_cov_7.203046_g80572_i0 PRJNA641707 83235 246 7.203046 17.71949316 Abditibacteriota bacterium 2783868 Bacteria Bacteria 67 7.37e-11   NR BCM88180.1 2783868 g80572 i0 90.6 0.390243902439024 32 3 39 0 149 244 272 303 BCM88180.1 hypothetical protein IAD21_00007 [Abditibacteriota bacterium] diamond 96 67 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
31250162 31250162 PRJNA641707_P_NODE_270595_length_174_cov_3.376000_g267932_i0 PRJNA641707 270595 174 3.376 5.87424 Abditibacterium sp. 2109264 Bacteria Bacteria 45.4 0.00159   NR HEX8464976.1 2109264 g267932 i0 61.3 1.06896551724138 31 11 51.7 1 169 80 296 326 HEX8464976.1 H-X9-DG-CTERM domain-containing protein [Abditibacterium sp.] diamond 186 45.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
31408528 31408528 PRJNA641707_P_NODE_75516_length_246_cov_13.167513_g72853_i0 PRJNA641707 75516 246 13.167513 32.39208198 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 55.5 1.29e-6   NR MBV9864486.1 2800791 g72853 i0 33.3 2.70731707317073 111 43 97.6 1 244 5 570 680 MBV9864486.1 carboxypeptidase regulatory-like domain-containing protein [Abditibacteriaceae bacterium] diamond 666 55.5 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31566685 31566685 PRJNA641707_P_NODE_144376_length_240_cov_8.319372_g141713_i0 PRJNA641707 144376 240 8.319372 19.9664928 Abditibacteriaceae bacterium 2800791 Bacteria Bacteria 62.4 2.27e-9   NR HEX8551560.1 2800791 g141713 i0 43.4 1.0375 83 39 93.8 1 3 227 166 248 HEX8551560.1 beta-ketoacyl synthase N-terminal-like domain-containing protein [Abditibacteriaceae bacterium] diamond 249 62.4 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae   Abditibacteriaceae bacterium
31692932 31692932 PRJNA641707_P_NODE_182497_length_200_cov_2.139073_g179834_i0 PRJNA641707 182497 200 2.139073 4.278146 Abditibacterium utsteinense 1960156 Bacteria Bacteria 65.5 1.83e-10   NR WP_106381296.1 1960156 g179834 i0 97.1 0.51 34 1 51 0 3 104 195 228 WP_106381296.1 DNA polymerase III subunit beta [Abditibacterium utsteinense] diamond 102 65.5 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense
31882719 31882719 PRJNA641707_P_NODE_256217_length_179_cov_12.223077_g253554_i0 PRJNA641707 256217 179 12.223077 21.87930783 Abditibacteriota bacterium 2783868 Bacteria Bacteria 55.5 4.85e-7   NR BCM89456.1 2783868 g253554 i0 52.3 1.08938547486034 65 24 97.2 2 4 177 181 245 BCM89456.1 hypothetical protein IAD21_01302 [Abditibacteriota bacterium] diamond 195 55.5 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
32294565 32294565 PRJNA641707_P_NODE_329679_length_154_cov_5.495238_g327016_i0 PRJNA641707 329679 154 5.495238 8.46266652 Abditibacterium sp. 2109264 Bacteria Bacteria 89.7 1.7e-19   NR HEX9997459.1 2109264 g327016 i0 80.4 0.993506493506494 51 10 99.4 0 153 1 328 378 HEX9997459.1 hypothetical protein [Abditibacterium sp.] diamond 153 89.7 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
32357721 32357721 PRJNA641707_P_NODE_277739_length_171_cov_4.901639_g275076_i0 PRJNA641707 277739 171 4.901639 8.38180269 Abditibacterium sp. 2109264 Bacteria Bacteria 107 1.6600000000000003e-27   NR HEX9995754.1 2109264 g275076 i0 87.3 1.92982456140351 55 7 96.5 0 5 169 17 71 HEX9995754.1 G/U mismatch-specific DNA glycosylase [Abditibacterium sp.] diamond 330 107 1 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium sp.
32369994 32369994 PRJNA641707_P_NODE_190859_length_198_cov_22.308725_g188196_i0 PRJNA641707 190859 198 22.308725 44.1712755 Abditibacterium 2109263 Bacteria Bacteria 80.5 6.94e-16   NR WP_157947649.1 1960156 g188196 i0 63.5 5.84848484848485 63 21 92.4 1 11 193 147 209 WP_157947649.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Abditibacterium utsteinense] diamond 1158 81.3 0.990159901599016 Bacteria   Pseudomonadati Abditibacteriota Abditibacteriia Abditibacteriales Abditibacteriaceae Abditibacterium Abditibacterium utsteinense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;