RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA640350" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA640350 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29796585 29796585 PRJNA640350_P_NODE_32551_length_166_cov_1.671533_g32390_i0 PRJNA640350 32551 166 1.671533 2.77474478 African cichlid piscichuvirus 3065075 Viruses Viruses 41.2 0.046   NR WLN26256.1 3065075 g32390 i0 40 0.903614457831325 50 30 90.4 0 12 161 98 147 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 150 41.2 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
30681116 30681116 PRJNA640350_P_NODE_39093_length_153_cov_2.362903_g38932_i0 PRJNA640350 39093 153 2.362903 3.61524159 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 48.9 7.5e-5   NR XNT20836.1 2951531 g38932 i0 50 0.941176470588235 48 24 94.1 0 1 144 167 214 XNT20836.1 MAG: RNA-dependent RNA polymerase [Chuviridae sp.] diamond 144 48.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   Salarius guttatus piscichuvirus
30870883 30870883 PRJNA640350_P_NODE_19394_length_229_cov_3.460000_g19233_i0 PRJNA640350 19394 229 3.46 7.9234 African cichlid piscichuvirus 3065075 Viruses Viruses 74.3 2.38e-13   NR WLN26256.1 3065075 g19233 i0 45.3 0.982532751091703 75 41 98.3 0 228 4 147 221 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 225 74.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;