RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA640350" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640350 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26732485 26732485 PRJNA640350_P_NODE_32121_length_167_cov_1.840580_g31960_i0 PRJNA640350 32121 167 1.84058 3.0737686 Metschnikowia pulcherrima 27326 Fungi Fungi 102 5.840000000000001e-26   NR KAJ8135208.1 27326 g31960 i0 94.5 1.97604790419162 55 3 98.8 0 3 167 95 149 KAJ8135208.1 hypothetical protein OY671_011579, partial [Metschnikowia pulcherrima] diamond 330 102 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Metschnikowia Metschnikowia pulcherrima
27460395 27460395 PRJNA640350_P_NODE_24463_length_193_cov_1.646341_g24302_i0 PRJNA640350 24463 193 1.646341 3.17743813 Ophiobolus disseminans 1469910 Fungi Fungi 43.9 0.00753   NR KAF2826520.1 1469910 g24302 i0 39.3 1.83419689119171 61 32 94.8 2 189 7 285 340 KAF2826520.1 hypothetical protein CC86DRAFT_394454 [Ophiobolus disseminans] diamond 354 43.9 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Phaeosphaeriaceae Ophiobolus Ophiobolus disseminans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;