RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA640143" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA640143 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26764468 26764468 PRJNA640143_S_NODE_13601_length_236_cov_1.356784_g13391_i0 PRJNA640143 13601 236 1.356784 3.20201024 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 152 9.63e-41   NR HRI29929.1 2447898 g13391 i0 98.6 0.927966101694915 73 1 92.8 0 220 2 504 576 HRI29929.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 219 152 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
27554725 27554725 PRJNA640143_S_NODE_4444_length_387_cov_146.180000_g4240_i0 PRJNA640143 4444 387 146.18 565.7166 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 90.5 3.96e-18   NR HRK57996.1 2447898 g4240 i0 91.8 1.13953488372093 49 4 38 0 348 202 2039 2087 HRK57996.1 T9SS type A sorting domain-containing protein [Candidatus Kapaibacterium sp.] diamond 441 90.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
30238969 30238969 PRJNA640143_S_NODE_27012_length_169_cov_1.522727_g26802_i0 PRJNA640143 27012 169 1.522727 2.57340863 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 103 1.08e-25   NR HRE58045.1 2447898 g26802 i0 98 0.869822485207101 49 1 87 0 3 149 38 86 HRE58045.1 squalene/phytoene synthase family protein [Candidatus Kapaibacterium sp.] diamond 147 103 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;