RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA640143" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA640143 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30397451 30397451 PRJNA640143_S_NODE_26073_length_173_cov_1.125000_g25863_i0 PRJNA640143 26073 173 1.125 1.94625 Entomophthora benyvirus E 2592779 Viruses Viruses 53.5 2.27e-6   NR QED42962.1 2592779 g25863 i0 59.5 0.728323699421965 42 17 72.8 0 33 158 1625 1666 QED42962.1 putative RdRp [Entomophthora benyvirus E] diamond 126 53.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Benyviridae   Entomophthora benyvirus E
30409780 30409780 PRJNA640143_S_NODE_13_length_2306_cov_28.484795_g12_i0 PRJNA640143 13 2306 28.484795 656.8593727 Ghabrivirales 2732540 Viruses Viruses 506 2.909999999999999e-166   NR UUT40380.1 2971329 g12 i0 41.7 2.65915004336513 698 392 90.3 10 2239 158 1 687 UUT40380.1 coat protein [Geotrichum candidum totivirus 3b] diamond 6132 507 0.998027613412229 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Geotrichum candidum totivirus 3b

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;