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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA640143" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA640143 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19736948 19736948 PRJNA640143_S_NODE_5956_length_340_cov_54.112211_g5746_i0 PRJNA640143 5956 340 54.112211 183.9815174 root 1 Root_unresolved Root_unresolved 166 2.1999999999999997e-47   NR MDY0386670.1 1874737 g5746 i0 79 4.41176470588235 100 21 88.2 0 305 6 4 103 MDY0386670.1 IS200/IS605 family element RNA-guided endonuclease TnpB [Methanolobus sp.] diamond 1500 167 0.994011976047904 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp.
27554711 27554711 PRJNA640143_S_NODE_15284_length_223_cov_2.225806_g15074_i0 PRJNA640143 15284 223 2.225806 4.96354738 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 128 2.1e-32   NR NMA31642.1 2099674 g15074 i0 74 0.982062780269058 73 19 98.2 0 221 3 231 303 NMA31642.1 PHP domain-containing protein [Candidatus Methanofastidiosia archaeon] diamond 219 128 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
28641102 28641102 PRJNA640143_S_NODE_4807_length_374_cov_2.765579_g4597_i0 PRJNA640143 4807 374 2.765579 10.34326546 root 1 Root_unresolved Root_unresolved 44.7 0.0301   NR MCX9085671.1 2032688 g4597 i0 57.6 0.497326203208556 33 14 26.5 0 374 276 304 336 MCX9085671.1 tetratricopeptide repeat protein [Candidatus Methanoperedens sp.] diamond 186 45.1 0.991130820399113 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
29670032 29670032 PRJNA640143_S_NODE_17650_length_208_cov_4.315789_g17440_i0 PRJNA640143 17650 208 4.315789 8.97684112 Methanogenium sp. 2196 Archaea Archaea 83.6 3.89e-17   NR MFA5398591.1 2196 g17440 i0 56.1 0.951923076923077 66 29 95.2 0 5 202 186 251 MFA5398591.1 hypothetical protein [Methanogenium sp.] diamond 198 83.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
30902546 30902546 PRJNA640143_S_NODE_17954_length_206_cov_313.739645_g17744_i0 PRJNA640143 17954 206 313.739645 646.3036687 Methanofastidiosum sp. 2666341 Archaea Archaea 59.3 8.92e-10   NR MEN6379726.1 2666341 g17744 i0 49.1 0.771844660194175 53 27 77.2 0 47 205 9 61 MEN6379726.1 hypothetical protein [Methanofastidiosum sp.] diamond 159 59.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
32262666 32262666 PRJNA640143_S_NODE_15698_length_220_cov_6.000000_g15488_i0 PRJNA640143 15698 220 6 13.2 Methanofastidiosum sp. 2666341 Archaea Archaea 108 6.620000000000001e-26   NR HQK63031.1 2666341 g15488 i0 80.6 0.845454545454545 62 12 84.5 0 187 2 298 359 HQK63031.1 transposase [Methanofastidiosum sp.] diamond 186 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;