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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA640143" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 18 ✖

bioproject 1

  • PRJNA640143 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22286871 22286871 PRJNA640143_S_NODE_17198_length_211_cov_1.959770_g16988_i0 PRJNA640143 17198 211 1.95977 4.1351147 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 125 5.38e-32   NR MCC6234743.1 2026801 g16988 i0 85.7 0.995260663507109 70 10 99.5 0 211 2 219 288 MCC6234743.1 acyl-CoA carboxylase subunit beta [Verrucomicrobiales bacterium] diamond 210 125 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
27049519 27049519 PRJNA640143_S_NODE_7462_length_308_cov_26.800738_g7252_i0 PRJNA640143 7462 308 26.800738 82.54627304 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 137 7.99e-37   NR MCD7898052.1 2026779 g7252 i0 79.1 3.32142857142857 86 18 83.8 0 275 18 236 321 MCD7898052.1 ABC transporter permease [Planctomycetaceae bacterium] diamond 1023 137 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27870592 27870592 PRJNA640143_S_NODE_7005_length_318_cov_1.804270_g6795_i0 PRJNA640143 7005 318 1.80427 5.7375786 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 74.3 1.76e-14   NR MDD2461924.1 2212473 g6795 i0 67.3 2.45283018867925 52 16 48.1 1 32 184 1 52 MDD2461924.1 hypothetical protein [Kiritimatiellia bacterium] diamond 780 74.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28060087 28060087 PRJNA640143_S_NODE_25745_length_174_cov_1.503650_g25535_i0 PRJNA640143 25745 174 1.50365 2.616351 Chlamydiota bacterium 2081524 Bacteria Bacteria 112 1.18e-28   NR MES2344849.1 2081524 g25535 i0 93 1.94827586206897 57 4 98.3 0 173 3 108 164 MES2344849.1 IS982 family transposase [Chlamydiota bacterium] diamond 339 112 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28217737 28217737 PRJNA640143_S_NODE_13746_length_234_cov_268.015228_g13536_i0 PRJNA640143 13746 234 268.015228 627.15563352 Chlamydiota bacterium 2081524 Bacteria Bacteria 103 1.66e-24   NR MES2198641.1 2081524 g13536 i0 82.8 0.82051282051282 64 11 82.1 0 2 193 60 123 MES2198641.1 metal ABC transporter permease [Chlamydiota bacterium] diamond 192 103 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
28217741 28217741 PRJNA640143_S_NODE_17006_length_212_cov_2.348571_g16796_i0 PRJNA640143 17006 212 2.348571 4.97897052 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 96.3 2.8700000000000003e-21   NR MBX9923790.1 2047756 g16796 i0 62.9 0.990566037735849 70 26 99.1 0 211 2 18 87 MBX9923790.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 210 96.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
28293501 28293501 PRJNA640143_S_NODE_22306_length_186_cov_5.959732_g22096_i0 PRJNA640143 22306 186 5.959732 11.08510152 Planctomycetia 203683 Bacteria Bacteria 47.4 4.02e-5   NR HMC64266.1 2052164 g22096 i0 56.3 1.03225806451613 32 14 51.6 0 151 56 42 73 HMC64266.1 hypothetical protein [Gemmataceae bacterium] diamond 192 47.4 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29323000 29323000 PRJNA640143_S_NODE_9629_length_277_cov_2.287500_g9419_i0 PRJNA640143 9629 277 2.2875 6.336375 Candidatus Brocadiales bacterium 2760054 Bacteria Bacteria 131 4.41e-33   NR MBC8555018.1 2760054 g9419 i0 78.8 1.64620938628159 80 17 86.6 0 36 275 40 119 MBC8555018.1 hypothetical protein [Candidatus Brocadiales bacterium] diamond 456 131 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales     Candidatus Brocadiales bacterium
29386385 29386385 PRJNA640143_S_NODE_7189_length_314_cov_1.830325_g6979_i0 PRJNA640143 7189 314 1.830325 5.7472205 Candidatus Scalinduaceae bacterium 3015208 Bacteria Bacteria 43.9 0.0316   NR MFQ5965969.1 3015208 g6979 i0 72.4 0.277070063694268 29 8 27.7 0 72 158 382 410 MFQ5965969.1 IS1634 family transposase [Candidatus Scalinduaceae bacterium] diamond 87 43.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Candidatus Brocadiia Candidatus Brocadiales Candidatus Scalinduaceae   Candidatus Scalinduaceae bacterium
29606888 29606888 PRJNA640143_S_NODE_20550_length_194_cov_1.490446_g20340_i0 PRJNA640143 20550 194 1.490446 2.89146524 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 93.6 1.44e-20   NR HWE93427.1 2876886 g20340 i0 70 1.9020618556701 60 18 92.8 0 192 13 162 221 HWE93427.1 glycosyltransferase [Tepidisphaeraceae bacterium] diamond 369 93.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
29954669 29954669 PRJNA640143_S_NODE_14451_length_229_cov_2.666667_g14241_i0 PRJNA640143 14451 229 2.666667 6.10666743 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 69.3 1.56e-12   NR MDD5465836.1 2035772 g14241 i0 85.7 6.41921397379913 35 5 45.9 0 229 125 48 82 MDD5465836.1 sigma-70 family RNA polymerase sigma factor [Candidatus Omnitrophota bacterium] diamond 1470 69.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30807754 30807754 PRJNA640143_S_NODE_30694_length_156_cov_1.310924_g30484_i0 PRJNA640143 30694 156 1.310924 2.04504144 Opitutaceae bacterium 2006848 Bacteria Bacteria 89.4 2.3e-19   NR MBP7140831.1 2006848 g30484 i0 67.3 2 52 17 100 0 1 156 310 361 MBP7140831.1 multicopper oxidase domain-containing protein [Opitutaceae bacterium] diamond 312 89.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31154924 31154924 PRJNA640143_S_NODE_22555_length_185_cov_4.006757_g22345_i0 PRJNA640143 22555 185 4.006757 7.41250045 Blastopirellula retiformator 2527970 Bacteria Bacteria 39.7 0.0192   NR TWT34100.1 2527970 g22345 i0 66.7 0.389189189189189 24 8 38.9 0 106 35 6 29 TWT34100.1 hypothetical protein Enr8_14900 [Blastopirellula retiformator] diamond 72 39.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Blastopirellula Blastopirellula retiformator
31408345 31408345 PRJNA640143_S_NODE_8916_length_286_cov_1.526104_g8706_i0 PRJNA640143 8916 286 1.526104 4.36465744 Pirellulaceae bacterium 2699754 Bacteria Bacteria 54.3 5.41e-6   NR MFM8407592.1 2699754 g8706 i0 48.8 1.35314685314685 43 22 45.1 0 155 283 26 68 MFM8407592.1 heavy metal translocating P-type ATPase [Pirellulaceae bacterium] diamond 387 54.3 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
31452506 31452506 PRJNA640143_S_NODE_23976_length_180_cov_1.909091_g23766_i0 PRJNA640143 23976 180 1.909091 3.4363638 Bacteria 2 Bacteria Bacteria 56.2 2.71e-7   NR MDB5351354.1 2026780 g23766 i0 46.2 1.78333333333333 52 28 86.7 0 17 172 98 149 MDB5351354.1 hypothetical protein [Planctomycetota bacterium] diamond 321 56.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32483999 32483999 PRJNA640143_S_NODE_28959_length_162_cov_1.240000_g28749_i0 PRJNA640143 28959 162 1.24 2.0088 Prosthecobacter sp. 1965333 Bacteria Bacteria 39.7 0.0399   NR MFM7606245.1 1965333 g28749 i0 90 0.37037037037037 20 2 37 0 160 101 65 84 MFM7606245.1 hypothetical protein [Prosthecobacter sp.] diamond 60 39.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
32610225 32610225 PRJNA640143_S_NODE_16160_length_217_cov_2.294444_g15950_i0 PRJNA640143 16160 217 2.294444 4.97894348 Zavarzinella sp. 1914240 Bacteria Bacteria 53.9 2.96e-6   NR MEZ6141875.1 1914240 g15950 i0 41.5 0.732718894009217 53 31 73.3 0 55 213 257 309 MEZ6141875.1 hypothetical protein [Zavarzinella sp.] diamond 159 53.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Zavarzinella Zavarzinella sp.
32673061 32673061 PRJNA640143_S_NODE_7500_length_308_cov_2.509225_g7290_i0 PRJNA640143 7500 308 2.509225 7.728413 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.1 0.0469   NR MBU6300000.1 2026799 g7290 i0 45.6 0.555194805194805 57 26 50.6 1 81 236 32 88 MBU6300000.1 alpha/beta fold hydrolase [Verrucomicrobiota bacterium] diamond 171 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;