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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA640143" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 29 ✖

bioproject 1

  • PRJNA640143 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24836319 24836319 PRJNA640143_S_NODE_27100_length_169_cov_1.166667_g26890_i0 PRJNA640143 27100 169 1.166667 1.97166723 Patescibacteria group bacterium 2052139 Bacteria Bacteria 99.8 9.08e-23   NR MCC2632047.1 2052139 g26890 i0 90.9 0.976331360946746 55 5 97.6 0 166 2 427 481 MCC2632047.1 lysine--tRNA ligase [Patescibacteria group bacterium] diamond 165 99.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26777152 26777152 PRJNA640143_S_NODE_23221_length_183_cov_1.513699_g23011_i0 PRJNA640143 23221 183 1.513699 2.77006917 Bacteria 2 Bacteria Bacteria 82.8 3.4e-18   NR MBI2008035.1 1932011 g23011 i0 63.3 14.5901639344262 60 22 98.4 0 181 2 63 122 MBI2008035.1 peptide-methionine (S)-S-oxide reductase [Candidatus Amesbacteria bacterium] diamond 2670 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium
26827987 26827987 PRJNA640143_S_NODE_13841_length_234_cov_2.076142_g13631_i0 PRJNA640143 13841 234 2.076142 4.85817228 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 142 1.38e-42   NR NLD25260.1 2099670 g13631 i0 86.1 0.923076923076923 72 10 92.3 0 218 3 1 72 NLD25260.1 HNH endonuclease [Candidatus Dojkabacteria bacterium] diamond 216 142 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
26922853 26922853 PRJNA640143_S_NODE_26602_length_171_cov_1.111940_g26392_i0 PRJNA640143 26602 171 1.11194 1.9014174 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 54.3 3.38e-7   NR MDR3646765.1 2803731 g26392 i0 42.6 1.19298245614035 68 27 98.2 2 169 2 34 101 MDR3646765.1 hypothetical protein [Candidatus Babeliales bacterium] diamond 204 54.3 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
26954266 26954266 PRJNA640143_S_NODE_14282_length_230_cov_4.533679_g14072_i0 PRJNA640143 14282 230 4.533679 10.4274617 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57.8 3.16e-8   NR MDD4805060.1 2053589 g14072 i0 38.7 0.808695652173913 62 38 80.9 0 40 225 1 62 MDD4805060.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 186 57.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27219680 27219680 PRJNA640143_S_NODE_25902_length_173_cov_2.580882_g25692_i0 PRJNA640143 25902 173 2.580882 4.46492586 Candidatus Saccharimonas 1331051 Bacteria Bacteria 81.6 1.41e-16   NR QWB90966.1 1917697 g25692 i0 75.5 1.69942196531792 49 12 85 0 2 148 78 126 QWB90966.1 MAG: hypothetical protein HXL38_003235 [Candidatus Saccharimonas sp.] diamond 294 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
27302399 27302399 PRJNA640143_S_NODE_3883_length_411_cov_4.029412_g3684_i0 PRJNA640143 3883 411 4.029412 16.56088332 Patescibacteria group bacterium 2052139 Bacteria Bacteria 62.4 8.89e-10   NR MBP8688733.1 2052139 g3684 i0 64.1 0.284671532846715 39 14 28.5 0 240 124 5 43 MBP8688733.1 hypothetical protein [Patescibacteria group bacterium] diamond 117 62.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27523342 27523342 PRJNA640143_S_NODE_26423_length_171_cov_2.619403_g26213_i0 PRJNA640143 26423 171 2.619403 4.47917913 Patescibacteria group bacterium 2052139 Bacteria Bacteria 69.7 2.17e-12   NR MDQ5901203.1 2052139 g26213 i0 69.1 0.964912280701754 55 17 96.5 0 167 3 63 117 MDQ5901203.1 uncharacterized protein [Patescibacteria group bacterium] diamond 165 69.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27630720 27630720 PRJNA640143_S_NODE_6564_length_326_cov_42.114187_g6354_i0 PRJNA640143 6564 326 42.114187 137.29224962 Bacteria 2 Bacteria Bacteria 156 6.59e-44   NR OGM08288.1 1802478 g6354 i0 71.6 1.80368098159509 102 28 92.9 1 310 8 129 230 OGM08288.1 MAG: hypothetical protein A2Z67_01110 [Candidatus Woesebacteria bacterium RBG_13_36_22] diamond 588 157 0.993630573248408 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium RBG_13_36_22
27649790 27649790 PRJNA640143_S_NODE_32164_length_152_cov_1.182609_g31954_i0 PRJNA640143 32164 152 1.182609 1.79756568 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 67.8 1.28e-11   NR QQR50575.1 2052152 g31954 i0 85 1.57894736842105 40 6 78.9 0 2 121 180 219 QQR50575.1 MAG: Holliday junction branch migration DNA helicase RuvB [Candidatus Nomurabacteria bacterium] diamond 240 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
27997123 27997123 PRJNA640143_S_NODE_4745_length_376_cov_6.280236_g4537_i0 PRJNA640143 4745 376 6.280236 23.61368736 Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_ 1802133 Bacteria Bacteria 155 2.16e-41   NR OGL23191.1 1802133 g4537 i0 74.1 1.79521276595745 112 29 89.4 0 4 339 252 363 OGL23191.1 MAG: copper-translocating P-type ATPase [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30] diamond 675 155 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_46_30
28060076 28060076 PRJNA640143_S_NODE_10385_length_268_cov_1.848485_g10175_i0 PRJNA640143 10385 268 1.848485 4.9539398 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 80.9 3.51e-16   NR HJY83009.1 2838779 g10175 i0 74.1 0.649253731343284 58 14 64.9 1 242 69 33 89 HJY83009.1 IS1 family transposase [Candidatus Binatia bacterium] diamond 174 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28123303 28123303 PRJNA640143_S_NODE_16205_length_217_cov_1.483333_g15995_i0 PRJNA640143 16205 217 1.483333 3.21883261 Candidatus Gottesmanbacteria bacterium GW2 2282145 Bacteria Bacteria 45.1 0.00406   NR KKS98363.1 1618443 g15995 i0 41.1 1.54838709677419 56 33 77.4 0 1 168 337 392 KKS98363.1 MAG: hypothetical protein UV73_C0002G0077 [Candidatus Gottesmanbacteria bacterium GW2011_GWA2_43_14] diamond 336 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium GW2011_GWA2_43_14
28660183 28660183 PRJNA640143_S_NODE_9967_length_272_cov_226.778723_g9757_i0 PRJNA640143 9967 272 226.778723 616.83812656 Patescibacteria group bacterium 2052139 Bacteria Bacteria 90.1 3.51e-19   NR TAL14710.1 2052139 g9757 i0 65.3 0.827205882352941 75 26 82.7 0 10 234 7 81 TAL14710.1 MAG: DNA recombination protein RmuC, partial [Patescibacteria group bacterium] diamond 225 90.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28880954 28880954 PRJNA640143_S_NODE_26588_length_171_cov_1.164179_g26378_i0 PRJNA640143 26588 171 1.164179 1.99074609 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 42.4 0.02   NR MEO0091531.1 2052148 g26378 i0 35.2 0.947368421052632 54 29 94.7 1 7 168 132 179 MEO0091531.1 glycogen synthase GlgA [candidate division WOR-3 bacterium] diamond 162 42.4 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29070705 29070705 PRJNA640143_S_NODE_17488_length_209_cov_4.139535_g17278_i0 PRJNA640143 17488 209 4.139535 8.65162815 Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_ 2282145 Bacteria Bacteria 43.1 0.0173   NR OGG06918.1 1798376 g17278 i0 35.6 0.84688995215311 59 36 81.8 1 14 184 242 300 OGG06918.1 MAG: hypothetical protein A2777_03615 [Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_40_15] diamond 177 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Gottesmaniibacteriota         Candidatus Gottesmanbacteria bacterium RIFCSPHIGHO2_01_FULL_40_15
29575473 29575473 PRJNA640143_S_NODE_13090_length_240_cov_1.906404_g12880_i0 PRJNA640143 13090 240 1.906404 4.5753696 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 59.7 8.46e-9   NR HPQ78846.1 2099670 g12880 i0 52.1 0.8875 71 30 83.8 3 11 211 58 128 HPQ78846.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 213 59.7 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
30618033 30618033 PRJNA640143_S_NODE_24173_length_179_cov_4.633803_g23963_i0 PRJNA640143 24173 179 4.633803 8.29450737 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 43.5 0.00845   NR MCL2037661.1 2026720 g23963 i0 52.2 0.770949720670391 46 21 77.1 1 11 148 189 233 MCL2037661.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 138 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30712892 30712892 PRJNA640143_S_NODE_28094_length_165_cov_1.078125_g27884_i0 PRJNA640143 28094 165 1.078125 1.77890625 Patescibacteria group bacterium 2052139 Bacteria Bacteria 41.6 0.0322   NR HKB88562.1 2052139 g27884 i0 44.2 0.781818181818182 43 24 78.2 0 1 129 162 204 HKB88562.1 30S ribosomal protein S2 [Patescibacteria group bacterium] diamond 129 41.6 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30902542 30902542 PRJNA640143_S_NODE_14314_length_230_cov_2.461140_g14104_i0 PRJNA640143 14314 230 2.46114 5.660622 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 80.9 9.2e-17   NR HMS31291.1 2026720 g14104 i0 59.7 3 77 30 99.1 1 2 229 103 179 HMS31291.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 690 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31250015 31250015 PRJNA640143_S_NODE_15955_length_218_cov_15.243094_g15745_i0 PRJNA640143 15955 218 15.243094 33.22994492 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 66.6 1.02e-10   NR HNQ31543.1 2026804 g15745 i0 77.5 0.55045871559633 40 9 55 0 4 123 382 421 HNQ31543.1 hypothetical protein [Candidatus Woesebacteria bacterium] diamond 120 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
31345064 31345064 PRJNA640143_S_NODE_27136_length_168_cov_3.740458_g26926_i0 PRJNA640143 27136 168 3.740458 6.28396944 Candidatus Saccharibacteria bacterium HGW-Saccharibacteria-1 2013831 Bacteria Bacteria 85.5 9.22e-18   NR PKL31332.1 2013831 g26926 i0 83 1.66071428571429 47 8 83.9 0 141 1 362 408 PKL31332.1 MAG: hypothetical protein CVV43_03100 [Candidatus Saccharibacteria bacterium HGW-Saccharibacteria-1] diamond 279 85.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium HGW-Saccharibacteria-1
31439802 31439802 PRJNA640143_S_NODE_8256_length_295_cov_23.856589_g8046_i0 PRJNA640143 8256 295 23.856589 70.37693755 Candidatus Nanosyncoccus nanoralicus 2171996 Bacteria Bacteria 80.5 6.87e-18   NR WP_129604879.1 2171996 g8046 i0 90.9 0.884745762711864 44 4 44.7 0 268 137 1 44 WP_129604879.1 50S ribosomal protein L34 [Candidatus Nanosyncoccus nanoralicus] diamond 261 80.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanosyncoccales Candidatus Nanosyncoccaceae Candidatus Nanosyncoccus Candidatus Nanosyncoccus nanoralicus
31503294 31503294 PRJNA640143_S_NODE_16516_length_215_cov_1.573034_g16306_i0 PRJNA640143 16516 215 1.573034 3.3820231 Patescibacteria group bacterium 2052139 Bacteria Bacteria 94.4 3.49e-22   NR MDD5731930.1 2052139 g16306 i0 75.4 0.795348837209302 57 14 79.5 0 38 208 121 177 MDD5731930.1 acyltransferase [Patescibacteria group bacterium] diamond 171 94.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31914331 31914331 PRJNA640143_S_NODE_17197_length_211_cov_2.017241_g16987_i0 PRJNA640143 17197 211 2.017241 4.25637851 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.00579   NR MBP9757018.1 2053589 g16987 i0 48.8 0.611374407582938 43 19 61.1 1 80 208 13 52 MBP9757018.1 30S ribosomal protein S12 [Candidatus Paceibacterota bacterium] diamond 129 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32104149 32104149 PRJNA640143_S_NODE_32458_length_151_cov_1.368421_g32248_i0 PRJNA640143 32458 151 1.368421 2.06631571 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 47.4 2.5e-4   NR HEX6462224.1 2973664 g32248 i0 41.7 0.95364238410596 48 28 95.4 0 4 147 539 586 HEX6462224.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 144 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32148356 32148356 PRJNA640143_S_NODE_27038_length_169_cov_1.469697_g26828_i0 PRJNA640143 27038 169 1.469697 2.48378793 Candidatus Sulfotelmatobacter 2136116 Bacteria Bacteria 42.4 0.00428   NR KPJ74250.1 1703772 g26828 i0 64.3 2.50295857988166 28 10 49.7 0 163 80 1 28 KPJ74250.1 MAG: hypothetical protein AMJ52_01375 [candidate division TA06 bacterium DG_78] diamond 423 42.7 0.992974238875878 Bacteria Bacteria candidate phyla             candidate division TA06 bacterium DG_78
32230965 32230965 PRJNA640143_S_NODE_8158_length_297_cov_2.088462_g7948_i0 PRJNA640143 8158 297 2.088462 6.20273214 Candidatus Wallbacteria bacterium 2053640 Bacteria Bacteria 50.8 1.08e-4   NR MEZ7890120.1 2053640 g7948 i0 38.2 1.28282828282828 68 42 68.7 0 288 85 1441 1508 MEZ7890120.1 hypothetical protein [Candidatus Wallbacteria bacterium] diamond 381 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Walliibacteriota         Candidatus Wallbacteria bacterium
32811503 32811503 PRJNA640143_S_NODE_17000_length_212_cov_2.411429_g16790_i0 PRJNA640143 17000 212 2.411429 5.11222948 Bacteria 2 Bacteria Bacteria 117 1.54e-32   NR OGZ03679.1 1798657 g16790 i0 82.8 1.75471698113208 64 11 90.6 0 193 2 1 64 OGZ03679.1 MAG: 50S ribosomal protein L32 [Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_41_20] diamond 372 117 1 Bacteria Bacteria candidate phyla   Candidatus Lloydiibacteriota         Candidatus Lloydbacteria bacterium RIFCSPHIGHO2_01_FULL_41_20

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;