RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA638724" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA638724 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26922846 26922846 PRJNA638724_P_NODE_6682_length_250_cov_2.062147_g6596_i0 PRJNA638724 6682 250 2.062147 5.1553675 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 156 5.329999999999998e-42   NR WXH59494.1 3003959 g6596 i0 93.7 0.948 79 5 94.8 0 238 2 847 925 WXH59494.1 RdRp [Picornavirales sp.] diamond 237 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28880942 28880942 PRJNA638724_P_NODE_7488_length_241_cov_1.732143_g7402_i0 PRJNA638724 7488 241 1.732143 4.17446463 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 135 6.28e-35   NR WXH59495.1 3003959 g7402 i0 88.2 1.86721991701245 76 9 94.6 0 230 3 130 205 WXH59495.1 capsid protein [Picornavirales sp.] diamond 450 135 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29606885 29606885 PRJNA638724_P_NODE_1790_length_441_cov_2.195652_g1704_i0 PRJNA638724 1790 441 2.195652 9.68282532 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 269 3.24e-82   NR WXH59495.1 3003959 g1704 i0 96.5 0.972789115646258 143 5 97.3 0 12 440 548 690 WXH59495.1 capsid protein [Picornavirales sp.] diamond 429 269 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29638466 29638466 PRJNA638724_P_NODE_5330_length_277_cov_1.553922_g5244_i0 PRJNA638724 5330 277 1.553922 4.30436394 Solemoviridae sp. 2715208 Viruses Viruses 79 1.01e-14   NR QYV43073.1 2715208 g5244 i0 52.9 1.50541516245487 70 32 75.8 1 10 219 223 291 QYV43073.1 MAG: capsid protein [Solemoviridae sp.] diamond 417 79 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae   Solemoviridae sp.
29859819 29859819 PRJNA638724_P_NODE_6051_length_261_cov_1.372340_g5965_i0 PRJNA638724 6051 261 1.37234 3.5818074 Macrobrachium rosenbergii picorna-like virus 4 3132542 Viruses Viruses 111 3.93e-26   NR WWZ85593.1 3132542 g5965 i0 61.7 0.931034482758621 81 31 93.1 0 249 7 2741 2821 WWZ85593.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii picorna-like virus 4] diamond 243 111 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Macrobrachium rosenbergii picorna-like virus 4
30997345 30997345 PRJNA638724_P_NODE_954_length_572_cov_1.635271_g870_i0 PRJNA638724 954 572 1.635271 9.35375012 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 358 2.55e-115   NR WXH59495.1 3003959 g870 i0 92 0.980769230769231 187 15 98.1 0 12 572 693 879 WXH59495.1 capsid protein [Picornavirales sp.] diamond 561 358 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;