RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA638138" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA638138 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27143802 27143802 PRJNA638138_P_NODE_14202_length_289_cov_0.912037_g13987_i0 PRJNA638138 14202 289 0.912037 2.63578693 Sphagnurus paluster 117069 Fungi Fungi 44.3 0.0186   NR KAG5653515.1 117069 g13987 i0 35.6 0.757785467128028 73 45 75.8 1 257 39 599 669 KAG5653515.1 hypothetical protein H0H81_012588 [Sphagnurus paluster] diamond 219 44.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Lyophyllaceae Sphagnurus Sphagnurus paluster
27681567 27681567 PRJNA638138_P_NODE_26624_length_247_cov_0.885057_g26409_i0 PRJNA638138 26624 247 0.885057 2.18609079 Rhizoctonia solani 456999 Fungi Fungi 55.1 1.77e-6   NR CAE6460460.1 456999 g26409 i0 37.9 1.59109311740891 58 35 69.2 1 208 38 540 597 CAE6460460.1 unnamed protein product [Rhizoctonia solani] diamond 393 55.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani
31692851 31692851 PRJNA638138_P_NODE_32677_length_243_cov_0.905882_g32462_i0 PRJNA638138 32677 243 0.905882 2.20129326 Austropuccinia psidii 181123 Fungi Fungi 45.8 0.00308   NR MBW0524523.1 1389203 g32462 i0 52.9 0.827160493827161 34 16 42 0 3 104 1402 1435 MBW0524523.1 hypothetical protein [Austropuccinia psidii MF-1] diamond 201 45.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Sphaerophragmiaceae Austropuccinia Austropuccinia psidii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;