RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA637328" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA637328 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27649764 27649764 PRJNA637328_P_NODE_9464_length_300_cov_5.035857_g8989_i0 PRJNA637328 9464 300 5.035857 15.107571 Methanofastidiosum sp. 2666341 Archaea Archaea 70.1 3.2e-12   NR HNU61917.1 2666341 g8989 i0 61.2 0.49 49 18 49 1 1 147 8 55 HNU61917.1 hypothetical protein [Methanofastidiosum sp.] diamond 147 70.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.
30397435 30397435 PRJNA637328_P_NODE_12653_length_272_cov_1.147982_g12177_i0 PRJNA637328 12653 272 1.147982 3.12251104 Methanobacteriota archaeon 2026739 Archaea Archaea 123 2.8399999999999997e-31   NR MBP04986.1 2026739 g12177 i0 71.8 0.9375 85 24 93.8 0 5 259 86 170 MBP04986.1 hypothetical protein [Methanobacteriota archaeon] diamond 255 123 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;