RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA637328" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA637328 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31060742 31060742 PRJNA637328_P_NODE_17715_length_247_cov_1.020202_g17238_i0 PRJNA637328 17715 247 1.020202 2.51989894 Myxobolus squamalis 59785 Cnidaria other_Eukaryota 126 1.5299999999999999e-34   NR KAF1741946.1 59785 g17238 i0 77.8 0.983805668016194 81 18 98.4 0 245 3 54 134 KAF1741946.1 hypothetical protein MXB_1664 [Myxobolus squamalis] diamond 243 126 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
32830659 32830659 PRJNA637328_P_NODE_5300_length_382_cov_0.903904_g4825_i0 PRJNA637328 5300 382 0.903904 3.45291328 Henneguya salminicola 69463 Cnidaria other_Eukaryota 103 4.339999999999999e-24   NR KAF0989220.1 69463 g4825 i0 41.1 0.973821989528796 124 73 97.4 0 372 1 61 184 KAF0989220.1 hypothetical protein HZS_455, partial [Henneguya salminicola] diamond 372 103 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Henneguya Henneguya salminicola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;