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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA637328" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 24 ✖

tax_kingdom 1

bioproject 1

  • PRJNA637328 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3160012 3160012 PRJNA637328_P_NODE_20863_length_227_cov_7.314607_g20386_i0 PRJNA637328 20863 227 7.314607 16.60415789 Krasilnikoviella flava 526729 Bacteria Bacteria 139 7.08e-39   NR WP_139820991.1 526729 g20386 i0 89.3 0.991189427312775 75 8 99.1 0 226 2 28 102 WP_139820991.1 SH3 domain-containing protein [Krasilnikoviella flava] diamond 225 139 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Promicromonosporaceae Krasilnikoviella Krasilnikoviella flava
10813287 10813287 PRJNA637328_P_NODE_20889_length_227_cov_4.421348_g20412_i0 PRJNA637328 20889 227 4.421348 10.03645996 Bacteria 2 Bacteria Bacteria 160 1.07e-44   NR MDX5318603.1 1883427 g20412 i0 100 1.98237885462555 75 0 99.1 0 225 1 240 314 MDX5318603.1 [FeFe] hydrogenase, group A [Actinomycetes bacterium] diamond 450 160 1 Bacteria   Bacillati Actinomycetota Actinomycetes       Actinomycetes bacterium
18461053 18461053 PRJNA637328_P_NODE_13335_length_267_cov_3.068807_g12859_i0 PRJNA637328 13335 267 3.068807 8.19371469 Olsenella profusa 138595 Bacteria Bacteria 137 9.49e-39   NR WP_021726616.1 138595 g12859 i0 98.5 0.752808988764045 67 1 75.3 0 267 67 139 205 WP_021726616.1 sulfurtransferase-like selenium metabolism protein YedF [Olsenella profusa] diamond 201 137 1 Bacteria   Bacillati Actinomycetota Coriobacteriia Coriobacteriales Atopobiaceae Olsenella Olsenella profusa
19735694 19735694 PRJNA637328_P_NODE_13796_length_265_cov_0.944444_g13320_i0 PRJNA637328 13796 265 0.944444 2.5027766 Dermabacter 36739 Bacteria Bacteria 135 9.87e-36   NR WP_147594862.1 36739 g13320 i0 75.9 1.95849056603774 87 21 98.5 0 2 262 261 347 WP_147594862.1 MULTISPECIES: phage portal protein [Dermabacter] diamond 519 135 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Dermabacteraceae Dermabacter  
25381512 25381512 PRJNA637328_P_NODE_7260_length_332_cov_4.371025_g6785_i0 PRJNA637328 7260 332 4.371025 14.511803 Propioniciclava sp. 2038686 Bacteria Bacteria 139 1.49e-36   NR MFV0452586.1 2038686 g6785 i0 65.8 1.03012048192771 114 34 98.5 1 2 328 230 343 MFV0452586.1 TrkH family potassium uptake protein [Propioniciclava sp.] diamond 342 139 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae Propioniciclava Propioniciclava sp.
26744975 26744975 PRJNA637328_P_NODE_13881_length_264_cov_2.846512_g13404_i0 PRJNA637328 13881 264 2.846512 7.51479168 Actinomycetota 201174 Bacteria Bacteria 169 3.8999999999999997e-48   NR WP_134206232.1 404941 g13404 i0 87.5 7 88 11 100 0 1 264 223 310 WP_134206232.1 Eco57I restriction-modification methylase domain-containing protein [Mycobacteroides salmoniphilum] diamond 1848 169 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacteroides Mycobacteroides salmoniphilum
26891398 26891398 PRJNA637328_P_NODE_12301_length_274_cov_4.351111_g11825_i0 PRJNA637328 12301 274 4.351111 11.92204414 Corynebacterium urealyticum 43771 Bacteria Bacteria 87.4 1.09e-17   NR PZP03286.1 43771 g11825 i0 45.6 0.985401459854015 90 45 98.5 1 4 273 1265 1350 PZP03286.1 MAG: hypothetical protein DI609_01185 [Corynebacterium urealyticum] diamond 270 87.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium Corynebacterium urealyticum
26954254 26954254 PRJNA637328_P_NODE_14022_length_263_cov_17.939252_g13545_i0 PRJNA637328 14022 263 17.939252 47.18023276 Microbispora sp. NPDC 1898321 Bacteria Bacteria 42.7 0.0425   NR WP_367743503.1 3154929 g13545 i0 46 0.570342205323194 50 23 53.6 2 44 184 193 241 WP_367743503.1 cellulose binding domain-containing protein, partial [Microbispora sp. NPDC049125] diamond 150 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Streptosporangiales Streptosporangiaceae Microbispora Microbispora sp. NPDC049125
27270599 27270599 PRJNA637328_P_NODE_20043_length_233_cov_12.331522_g19566_i0 PRJNA637328 20043 233 12.331522 28.73244626 Virgisporangium ochraceum 65505 Bacteria Bacteria 42.7 0.0333   NR WP_203930126.1 65505 g19566 i0 38.9 0.695278969957081 54 30 69.5 1 30 191 411 461 WP_203930126.1 ATP-binding protein [Virgisporangium ochraceum] diamond 162 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Virgisporangium Virgisporangium ochraceum
27491861 27491861 PRJNA637328_P_NODE_19063_length_241_cov_2.869792_g18586_i0 PRJNA637328 19063 241 2.869792 6.91619872 Actinokineospora globicatena 103729 Bacteria Bacteria 40.4 0.0491   NR GLW80975.1 103729 g18586 i0 40.4 0.5850622406639 47 28 58.5 0 101 241 15 61 GLW80975.1 hypothetical protein Aglo01_54560 [Actinokineospora globicatena] diamond 141 40.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Actinokineospora Actinokineospora globicatena
27504468 27504468 PRJNA637328_P_NODE_19523_length_237_cov_5.111702_g19046_i0 PRJNA637328 19523 237 5.111702 12.11473374 root 1 Root_unresolved Root_unresolved 88.6 9.2e-20   NR WP_416587093.1 2047 g19046 i0 57.5 3.64556962025316 73 31 92.4 0 237 19 53 125 WP_416587093.1 hypothetical protein [Rothia dentocariosa] diamond 864 89.4 0.991051454138702 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Rothia Rothia dentocariosa
27586589 27586589 PRJNA637328_P_NODE_22084_length_206_cov_4.885350_g21607_i0 PRJNA637328 22084 206 4.88535 10.063821 Kytococcus aerolatus 592308 Bacteria Bacteria 114 8.28e-28   NR WP_234994269.1 592308 g21607 i0 100 0.844660194174757 58 0 84.5 0 205 32 457 514 WP_234994269.1 potassium/proton antiporter [Kytococcus aerolatus] diamond 174 114 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Kytococcaceae Kytococcus Kytococcus aerolatus
27630714 27630714 PRJNA637328_P_NODE_22104_length_205_cov_12.455128_g21627_i0 PRJNA637328 22104 205 12.455128 25.5330124 Saccharothrix 2071 Bacteria Bacteria 42.7 0.0233   NR GAA3458570.1 33920 g21627 i0 44.9 1.82926829268293 49 26 70.2 1 29 172 13 61 GAA3458570.1 hypothetical protein GCM10018963_05830 [Saccharothrix longispora] diamond 375 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Saccharothrix Saccharothrix longispora
28502213 28502213 PRJNA637328_P_NODE_14367_length_262_cov_0.957746_g13890_i0 PRJNA637328 14367 262 0.957746 2.50929452 Coriobacteriia bacterium 2052159 Bacteria Bacteria 158 1.38e-45   NR MEA5075265.1 2052159 g13890 i0 94.3 0.99618320610687 87 5 99.6 0 2 262 27 113 MEA5075265.1 cytochrome c biogenesis protein [Coriobacteriia bacterium] diamond 261 158 1 Bacteria   Bacillati Actinomycetota Coriobacteriia       Coriobacteriia bacterium
28754760 28754760 PRJNA637328_P_NODE_21667_length_213_cov_5.079268_g21190_i0 PRJNA637328 21667 213 5.079268 10.81884084 Galactobacter valiniphilus 2676122 Bacteria Bacteria 42 0.0387   NR WP_119424843.1 2676122 g21190 i0 37 0.647887323943662 46 29 64.8 0 197 60 37 82 WP_119424843.1 DedA family protein [Galactobacter valiniphilus] diamond 138 42 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Galactobacter Galactobacter valiniphilus
28944504 28944504 PRJNA637328_P_NODE_20068_length_233_cov_4.391304_g19591_i0 PRJNA637328 20068 233 4.391304 10.23173832 Actinomyces oris 544580 Bacteria Bacteria 153 3.85e-44   NR WP_314133524.1 544580 g19591 i0 97.4 0.991416309012876 77 2 99.1 0 3 233 188 264 WP_314133524.1 hypothetical protein [Actinomyces oris] diamond 231 153 1 Bacteria   Bacillati Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces Actinomyces oris
29102154 29102154 PRJNA637328_P_NODE_18408_length_244_cov_1.046154_g17931_i0 PRJNA637328 18408 244 1.046154 2.55261576 Corynebacterium 1716 Bacteria Bacteria 174 1.66e-52   NR WP_230384195.1 1716 g17931 i0 100 0.995901639344262 81 0 99.6 0 243 1 27 107 WP_230384195.1 MULTISPECIES: NAD(+) diphosphatase [Corynebacterium] diamond 243 174 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Corynebacteriaceae Corynebacterium  
29417682 29417682 PRJNA637328_P_NODE_10869_length_286_cov_2.320675_g10394_i0 PRJNA637328 10869 286 2.320675 6.6371305 Actinomyces timonensis 1288391 Bacteria Bacteria 63.5 2.81e-9   NR WP_154652411.1 1288391 g10394 i0 39.8 1.95104895104895 93 55 96.5 1 281 6 48 140 WP_154652411.1 O-antigen ligase family protein [Actinomyces timonensis] diamond 558 63.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Actinomycetales Actinomycetaceae Actinomyces Actinomyces timonensis
30049210 30049210 PRJNA637328_P_NODE_20771_length_228_cov_3.245810_g20294_i0 PRJNA637328 20771 228 3.24581 7.4004468 Brevibacterium sp. CFH 1 1701 Bacteria Bacteria 45.1 0.0048   NR WP_152348748.1 2585207 g20294 i0 35.8 0.697368421052632 53 30 69.7 2 195 37 229 277 WP_152348748.1 amidohydrolase [Brevibacterium sp. CFH 10365] diamond 159 45.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Brevibacteriaceae Brevibacterium Brevibacterium sp. CFH 10365
30725322 30725322 PRJNA637328_P_NODE_21234_length_222_cov_5.710983_g20757_i0 PRJNA637328 21234 222 5.710983 12.67838226 Bacteria 2 Bacteria Bacteria 42.7 0.0272   NR MEO8108094.1 1883427 g20757 i0 30.5 1.47297297297297 59 41 79.7 0 13 189 20 78 MEO8108094.1 DUF1206 domain-containing protein [Actinomycetes bacterium] diamond 327 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes       Actinomycetes bacterium
30807738 30807738 PRJNA637328_P_NODE_19674_length_236_cov_3.978610_g19197_i0 PRJNA637328 19674 236 3.97861 9.3895196 Streptomyces varsoviensis 67373 Bacteria Bacteria 42.4 0.0435   NR WP_362164206.1 67373 g19197 i0 41.9 0.788135593220339 62 28 68.6 4 60 221 14 75 WP_362164206.1 hypothetical protein [Streptomyces varsoviensis] diamond 186 42.4 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces varsoviensis
31629668 31629668 PRJNA637328_P_NODE_20336_length_231_cov_4.686813_g19859_i0 PRJNA637328 20336 231 4.686813 10.82653803 Mycobacterium sp. 1785 Bacteria Bacteria 92 2.46e-20   NR MDT5365635.1 1785 g19859 i0 49.4 1 77 39 100 0 231 1 24 100 MDT5365635.1 hypothetical protein [Mycobacterium sp.] diamond 231 92 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
31819323 31819323 PRJNA637328_P_NODE_17737_length_246_cov_9.081218_g17260_i0 PRJNA637328 17737 246 9.081218 22.33979628 Actinomycetota bacterium 2900548 Bacteria Bacteria 40.4 0.0353   NR MEI6497093.1 2900548 g17260 i0 40.4 0.634146341463415 52 31 63.4 0 58 213 3 54 MEI6497093.1 DUF2510 domain-containing protein [Actinomycetota bacterium] diamond 156 40.4 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
32452478 32452478 PRJNA637328_P_NODE_14899_length_259_cov_1.761905_g14422_i0 PRJNA637328 14899 259 1.761905 4.56333395 Streptomyces sp. NBC_ 1931 Bacteria Bacteria 43.5 0.00951   NR WP_371677181.1 2903808 g14422 i0 30.3 0.88030888030888 76 49 86.9 2 29 253 52 124 WP_371677181.1 hypothetical protein [Streptomyces sp. NBC_01276] diamond 228 43.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces sp. NBC_01276

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;